Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 AC074050.1-201ENST00000563247 211 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 MIR4765-201ENST00000585007 77 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 AC092747.3-201ENST00000603769 301 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RBM11P1-201ENST00000604951 799 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 AC123912.5-201ENST00000605470 343 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-6P-201ENST00000606623 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 MIR3529-201ENST00000637713 78 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 MTND5P30-201ENST00000452896 1731 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 Y_RNA.333-201ENST00000365274 102 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AL360182.1-201ENST00000397433 468 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 FO393413.1-201ENST00000402892 195 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AL133475.1-201ENST00000404414 305 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 RNA5SP492-201ENST00000411330 114 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 RPL19P1-201ENST00000411635 428 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 MTND1P2-201ENST00000430604 821 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AL139415.2-201ENST00000431968 163 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 FABP5P14-201ENST00000437273 393 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC012308.1-201ENST00000451232 178 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC087884.1-201ENST00000469738 328 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 Y_RNA.654-201ENST00000497848 106 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC098799.2-201ENST00000509466 868 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 RNU5B-3P-201ENST00000516601 115 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC069113.1-201ENST00000517763 267 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC134698.4-201ENST00000523451 826 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC243972.3-201ENST00000539655 198 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC023050.3-201ENST00000541142 333 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC090616.3-201ENST00000582184 217 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC010525.2-201ENST00000590920 195 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 APOOP1-201ENST00000604695 592 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 RNU6-91P-201ENST00000607774 107 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 AC103705.1-201ENST00000619013 241 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 RBBP8P1-201ENST00000449447 1844 ntBASIC2.81□□□□□ -1.96
LIMA1Q9UHB6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AC080128.1-201ENST00000474389 1917 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 RNU6-1180P-201ENST00000364935 107 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 RNU6-843P-201ENST00000384454 104 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 MIR491-201ENST00000384877 84 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 ARL5AP1-201ENST00000418991 388 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 RNU6-1208P-201ENST00000459588 107 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 RPL23AP45-201ENST00000476406 468 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AC092989.1-201ENST00000481235 277 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 CYCSP27-201ENST00000527643 293 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 HSPE1P20-201ENST00000538133 289 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AC078814.3-201ENST00000553036 491 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AL133241.1-201ENST00000556832 487 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AC021646.1-201ENST00000605469 484 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 AC092807.2-201ENST00000609367 243 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 HAUS6P2-201ENST00000433254 2404 ntBASIC2.8□□□□□ -1.96
LIMA1Q9UHB6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 AC138393.1-203ENST00000327086 343 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 Y_RNA.89-201ENST00000363031 102 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 Y_RNA.390-201ENST00000383932 102 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 RNA5SP181-201ENST00000410246 98 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 AL096701.2-201ENST00000416920 238 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 SNRPEP10-201ENST00000420249 274 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 MICF-203ENST00000432679 129 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 ERLEC1P1-201ENST00000433806 578 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 snoU13.22-201ENST00000459428 104 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 RPL7P43-201ENST00000478876 753 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 RPS29P25-201ENST00000481709 171 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 RPL36AP48-201ENST00000485521 314 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 AC069439.1-201ENST00000494739 167 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 MTCYBP40-201ENST00000509390 1135 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 RNA5SP112-201ENST00000515937 99 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 SNORA14.1-201ENST00000516113 141 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 RNA5SP367-201ENST00000516557 118 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 SNORA59B-202ENST00000578183 701 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 BNIP3P22-201ENST00000593399 556 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 NRBF2P5-201ENST00000603087 788 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 RNU6-89P-201ENST00000606519 100 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 MIR7157-201ENST00000635801 60 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 U4.7-201ENST00000638126 106 ntBASIC2.79□□□□□ -1.96
LIMA1Q9UHB6 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms