Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRFN1Q9P244 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 RNU6-486P-201ENST00000363116 107 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LRFN1Q9P244 AL445529.1-201ENST00000398713 389 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AL357075.1-201ENST00000404107 726 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AL133475.1-201ENST00000404414 305 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RN7SKP220-201ENST00000410611 288 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 NUP35P1-201ENST00000422734 947 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 Z98742.2-201ENST00000431564 187 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 MTND3P23-201ENST00000431980 347 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RPS15AP10-201ENST00000432472 382 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC236972.1-201ENST00000433225 199 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 Z96811.1-201ENST00000445880 108 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 Z75741.1-201ENST00000446793 314 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RNU6-1037P-201ENST00000459571 107 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RNU6-329P-201ENST00000459618 107 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RPS27P29-201ENST00000463110 252 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RPS4XP22-201ENST00000480755 780 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RPL36AP48-201ENST00000485521 314 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RPL22P13-201ENST00000493291 347 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RNU4-49P-201ENST00000516080 140 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RNA5SP380-201ENST00000517190 98 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC109329.1-201ENST00000518744 317 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC026371.1-201ENST00000551867 419 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 MIR4513-201ENST00000581077 86 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AL022345.1-201ENST00000607292 135 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AL359314.1-201ENST00000616913 261 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC024581.2-201ENST00000619986 252 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC090617.7-201ENST00000623952 126 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 MTND5P27-201ENST00000428871 1720 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC017071.1-201ENST00000564407 2204 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 AC026241.1-201ENST00000517873 2142 ntBASIC3.04□□□□□ -1.92
LRFN1Q9P244 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.04□□□□□ -1.92
LRFN1Q9P244 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LRFN1Q9P244 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LRFN1Q9P244 RNA5SP374-201ENST00000362939 125 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 Y_RNA.142-201ENST00000363491 102 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 RNU6-461P-201ENST00000364195 107 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 SNORD81.2-201ENST00000365153 76 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 RNU6-805P-201ENST00000365643 106 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LRFN1Q9P244 RNA5SP293-201ENST00000410527 113 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 RNU4-47P-201ENST00000410876 114 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 MTND3P8-201ENST00000412909 339 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.03□□□□□ -1.92
LRFN1Q9P244 PDCL2P1-201ENST00000419302 352 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.03□□□□□ -1.92
LRFN1Q9P244 SAR1AP4-201ENST00000429225 591 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 AL353705.1-201ENST00000433468 480 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.03□□□□□ -1.92
LRFN1Q9P244 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
LRFN1Q9P244 AC124916.1-201ENST00000444020 547 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 UBE2DNL-203ENST00000474922 222 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 RN7SL504P-201ENST00000494496 287 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.03□□□□□ -1.92
LRFN1Q9P244 RN7SKP282-201ENST00000516824 299 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.03□□□□□ -1.92
LRFN1Q9P244 AC104576.1-201ENST00000524225 88 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 COX6CP5-201ENST00000527162 228 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.03□□□□□ -1.92
LRFN1Q9P244 MIR4742-201ENST00000581069 85 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 MIR4325-201ENST00000583049 90 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.03□□□□□ -1.92
LRFN1Q9P244 AL117336.2-201ENST00000602435 335 ntBASIC3.03□□□□□ -1.92
LRFN1Q9P244 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LRFN1Q9P244 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
LRFN1Q9P244 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
LRFN1Q9P244 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LRFN1Q9P244 SNORD114-19-201ENST00000363072 75 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 Y_RNA.263-201ENST00000364659 114 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LRFN1Q9P244 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
LRFN1Q9P244 SET-203ENST00000372688 801 ntTSL 2 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 MIR627-201ENST00000384979 97 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 UBA52P6-201ENST00000399822 382 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 RN7SKP32-201ENST00000410167 303 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 RNU6-1245P-201ENST00000411130 106 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC097463.2-201ENST00000421074 142 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC243964.1-201ENST00000441814 261 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC093019.1-201ENST00000443135 252 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC008526.1-201ENST00000509149 338 ntBASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.02□□□□□ -1.93
LRFN1Q9P244 SCOCP1-201ENST00000554676 349 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms