Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 CYCSP33-201ENST00000414485 327 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AL353621.1-201ENST00000418219 243 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 RPS15AP7-201ENST00000439294 405 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AL353572.1-201ENST00000442490 417 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AL078601.1-201ENST00000444542 271 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AL513328.1-201ENST00000446460 224 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AL671855.1-201ENST00000446875 1203 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 RNU7-167P-201ENST00000459160 62 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 snoU109.2-201ENST00000459316 135 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AC117503.1-201ENST00000472241 394 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 Y_RNA.654-201ENST00000497848 106 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 RNU6-189P-201ENST00000516120 101 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 RNU6-703P-201ENST00000516946 107 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AC107953.1-201ENST00000522216 297 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AP000763.2-201ENST00000540641 163 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 CYCSP39-201ENST00000565821 309 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 MYL12BP1-201ENST00000569826 507 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 U6.42-201ENST00000618440 107 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 MIR8057-201ENST00000620957 69 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 U4.3-201ENST00000621047 82 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AL031601.2-202ENST00000622650 282 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 DUXAP9-208ENST00000622815 614 ntBASIC2.42□□□□□ -2.02
NDE1Q9NXR1 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
NDE1Q9NXR1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 MIR412-201ENST00000362142 91 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 Y_RNA.157-201ENST00000363638 102 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 RNU6-266P-201ENST00000364225 107 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 FGF7P8-201ENST00000402994 292 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 RNA5SP118-201ENST00000410385 109 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 RNU6-607P-201ENST00000411283 108 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 AC016831.2-201ENST00000417179 352 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 AC236972.1-201ENST00000433225 199 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 AL714022.1-201ENST00000439897 151 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 BRK1P2-201ENST00000442875 223 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 AC091885.1-201ENST00000506658 268 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 RPL23AP94-201ENST00000512518 302 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 RNU6-1314P-201ENST00000517139 104 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 MIR4782-201ENST00000577987 79 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 AC012493.2-201ENST00000595083 291 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 AC123912.5-201ENST00000605470 343 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 Z82243.1-201ENST00000609432 473 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 MIR6895-201ENST00000613497 78 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.41□□□□□ -2.02
NDE1Q9NXR1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NDE1Q9NXR1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
NDE1Q9NXR1 AC138393.1-203ENST00000327086 343 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 MIRLET7G-201ENST00000362280 84 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.88-201ENST00000363029 99 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 SNORD114-30-201ENST00000364448 72 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 RNU6-898P-201ENST00000365627 104 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 Y_RNA.399-201ENST00000383955 105 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.4□□□□□ -2.03
NDE1Q9NXR1 EEF1A1P41-201ENST00000414667 207 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC138393.2-201ENST00000414742 246 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC087499.2-201ENST00000432861 149 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC007547.1-201ENST00000462177 490 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 UBE2DNL-203ENST00000474922 222 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC011005.2-201ENST00000487324 359 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC114786.4-201ENST00000508771 728 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 MIR892C-201ENST00000516410 77 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 SNORA20.3-201ENST00000516880 132 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 RNU6-273P-201ENST00000516937 96 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 MTCO3P23-201ENST00000561363 289 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC005730.3-201ENST00000583067 366 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC018638.8-201ENST00000588755 281 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC103705.1-201ENST00000619013 241 ntBASIC2.4□□□□□ -2.03
NDE1Q9NXR1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.4□□□□□ -2.03
NDE1Q9NXR1 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
NDE1Q9NXR1 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NDE1Q9NXR1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 SNORA72.1-201ENST00000363485 129 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 RNU1-51P-201ENST00000365345 176 ntBASIC2.39□□□□□ -2.03
NDE1Q9NXR1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms