Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC021205.2-201ENST00000480069 347 ntBASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 PHBP14-201ENST00000512887 367 ntBASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 SMURF2P1-201ENST00000514992 481 ntBASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 ACA59.1-201ENST00000515966 143 ntBASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 RPL23AP78-201ENST00000599928 470 ntBASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 AC039056.2-201ENST00000622261 511 ntBASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 MTND4LP32-201ENST00000636111 270 ntBASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 AC017071.1-201ENST00000564407 2204 ntBASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.88□□□□□ -1.95
LIN7CQ9NUP9 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 SNORA68.1-201ENST00000364537 132 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 RNU6-43P-201ENST00000384302 107 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 RNU6-1297P-201ENST00000384415 104 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 Y_RNA.509-201ENST00000384506 99 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 RNU6-1222P-201ENST00000384615 107 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 MIR200C-201ENST00000384980 68 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 Y_RNA.594-201ENST00000410373 140 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 RNU6-1050P-201ENST00000410388 107 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 AC091874.1-201ENST00000511402 339 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 Y_RNA.670-201ENST00000516255 105 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 Y_RNA.708-201ENST00000516950 96 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 APOOP3-201ENST00000536787 586 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 AC011494.1-201ENST00000596454 237 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 AC078795.3-201ENST00000602913 472 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 AC009229.3-201ENST00000608056 282 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 AC007792.1-201ENST00000623023 402 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 MTND5P30-201ENST00000452896 1731 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 AC002543.1-201ENST00000299783 1954 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 AC007823.1-201ENST00000569932 1566 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 MTND4P29-201ENST00000503122 1372 ntBASIC2.87□□□□□ -1.95
LIN7CQ9NUP9 Z75746.1-201ENST00000440243 2080 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 RNA5SP124-201ENST00000362739 110 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 RNU6-1010P-201ENST00000362757 107 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 RNU4-79P-201ENST00000362764 141 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 Y_RNA.123-201ENST00000363338 102 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 RNU6-529P-201ENST00000363383 104 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 SNORD32A-201ENST00000364805 84 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 RNU6-805P-201ENST00000365643 106 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 RNU6-842P-201ENST00000384269 107 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 RNU2-23P-201ENST00000410545 195 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AC126124.2-201ENST00000413542 321 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AC097463.2-201ENST00000421074 142 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AC146507.2-201ENST00000460608 476 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 RPL22P13-201ENST00000493291 347 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 RNU6-1213P-201ENST00000517075 94 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AC026403.1-201ENST00000518938 295 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 HPRT1P3-201ENST00000539521 576 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AC079598.5-201ENST00000547460 117 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AC109446.1-201ENST00000566172 220 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 MTCO3P13-201ENST00000577757 781 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AP000654.2-201ENST00000605633 586 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 PISRT1.1-201ENST00000616930 107 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AL034408.1-202ENST00000636088 415 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AC012442.3-202ENST00000636742 206 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AC009541.1-201ENST00000438279 2662 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 KPNA2P1-201ENST00000458289 1591 ntBASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
LIN7CQ9NUP9 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 AC092435.3-201ENST00000565538 3654 ntBASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 SNORD9-201ENST00000362566 104 ntBASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 RNU6-212P-201ENST00000362642 104 ntBASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 RNA5SP383-201ENST00000362934 120 ntBASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 U3.13-201ENST00000364804 214 ntBASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 SNORA75.4-201ENST00000391278 119 ntBASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 CYCSP4-201ENST00000429682 331 ntBASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.85□□□□□ -1.95
LIN7CQ9NUP9 AC236972.1-201ENST00000433225 199 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms