Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 MTND3P7-201ENST00000474435 343 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 RPL7P43-201ENST00000478876 753 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 FABP5P5-201ENST00000515537 406 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 RNU2-46P-201ENST00000517038 113 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 AC022878.1-201ENST00000530684 149 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 ANP32BP3-201ENST00000559213 706 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 AC012414.6-201ENST00000568241 401 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 AC005771.1-201ENST00000585581 349 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 AC021646.1-201ENST00000605469 484 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 NDUFA8P1-201ENST00000605525 367 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 AC092656.1-203ENST00000624134 423 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 MIR3529-201ENST00000637713 78 ntBASIC1.97□□□□□ -2.09
TM9SF3Q9HD45 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 Y_RNA.33-201ENST00000362591 102 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 RNU4-21P-201ENST00000362802 126 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 RNY4P34-201ENST00000364779 95 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 RNU6-190P-201ENST00000384154 102 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 MIR29C-201ENST00000385231 88 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 RNA5SP212-201ENST00000391223 107 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AL591034.2-201ENST00000402839 359 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 FTH1P15-201ENST00000406984 280 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 Z99497.1-201ENST00000421282 135 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 RPL23AP30-201ENST00000432419 501 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC245102.2-201ENST00000448956 180 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC007182.2-201ENST00000489251 402 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC018868.1-201ENST00000491307 315 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC109927.2-201ENST00000506416 303 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 RNU2-10P-201ENST00000516375 211 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 RNU2-44P-201ENST00000516795 194 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC109329.1-201ENST00000518744 317 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC022616.3-201ENST00000523940 148 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AL157871.3-201ENST00000557231 293 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC136619.2-201ENST00000563361 631 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 MIR1273C-201ENST00000578669 77 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 DEFB131E-202ENST00000602581 683 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AP000942.3-201ENST00000603702 160 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AP002360.4-201ENST00000606980 481 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC126118.1-201ENST00000607744 628 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AC091304.9-201ENST00000612091 226 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 AL354685.2-201ENST00000448218 1447 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 MTND4P4-201ENST00000439033 1366 ntBASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TM9SF3Q9HD45 SNORD3E-201ENST00000362899 217 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 U8.3-201ENST00000363321 132 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 RNU1-23P-201ENST00000363361 144 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 RNU6-395P-201ENST00000365662 106 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 RPS3AP36-201ENST00000398190 775 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 MRPL42P2-201ENST00000403169 426 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 AL033519.2-201ENST00000403958 392 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 Y_RNA.598-201ENST00000410480 95 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 POLHP1-201ENST00000411806 470 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 RNU6-123P-201ENST00000516163 102 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 Y_RNA.672-201ENST00000516289 104 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 RNU7-51P-201ENST00000516560 62 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 AP005639.2-201ENST00000527592 928 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 AL359999.1-201ENST00000604513 294 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 AC008250.2-201ENST00000615261 205 ntBASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TM9SF3Q9HD45 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 Y_RNA.22-201ENST00000362492 102 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 RNU6-960P-201ENST00000364056 120 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 RNU6-1032P-201ENST00000384100 107 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 RNU6-166P-201ENST00000384371 107 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 SUMO2P12-201ENST00000405924 140 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 AL030996.1-201ENST00000411430 235 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 MTND2P18-201ENST00000419962 1030 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 MTND2P29-201ENST00000438595 412 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 AC006512.1-201ENST00000468816 291 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 RPL23AP63-201ENST00000498752 471 ntBASIC1.94□□□□□ -2.1
TM9SF3Q9HD45 RBBP4P6-201ENST00000508098 202 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms