Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RNU2-14P-201ENST00000411053 191 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.82□□□□□ -1.8
CD248Q9HCU0 AC092447.6-201ENST00000414578 210 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 RPL21P38-201ENST00000418090 167 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 MYL8P-204ENST00000431574 518 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 AL159987.2-201ENST00000432754 307 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 RPL23AP83-201ENST00000434984 473 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.82□□□□□ -1.8
CD248Q9HCU0 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.82□□□□□ -1.8
CD248Q9HCU0 HSPD1P21-201ENST00000436541 245 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.82□□□□□ -1.8
CD248Q9HCU0 NDUFB1P2-201ENST00000449477 176 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD248Q9HCU0 RNA5SP164-201ENST00000516533 110 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 AC109329.1-201ENST00000518744 317 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 AC008011.1-201ENST00000545989 227 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.82□□□□□ -1.8
CD248Q9HCU0 AC004584.2-201ENST00000570407 410 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
CD248Q9HCU0 AL355877.2-201ENST00000603670 358 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 SNORA62.6-201ENST00000606322 83 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD248Q9HCU0 MIR7975-201ENST00000619350 68 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 AL031601.2-202ENST00000622650 282 ntBASIC3.82□□□□□ -1.8
CD248Q9HCU0 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD248Q9HCU0 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.82□□□□□ -1.8
CD248Q9HCU0 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CD248Q9HCU0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CD248Q9HCU0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
CD248Q9HCU0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.82□□□□□ -1.8
CD248Q9HCU0 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CD248Q9HCU0 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CD248Q9HCU0 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CD248Q9HCU0 Y_RNA.105-201ENST00000363182 111 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 Y_RNA.183-201ENST00000363882 113 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CD248Q9HCU0 AP002088.1-201ENST00000382740 395 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 MIR34B-201ENST00000385076 84 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 SNORA48.8-201ENST00000391324 134 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 RNU2-25P-201ENST00000411041 191 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 UBE2D3P2-201ENST00000424409 445 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 RPL21P40-201ENST00000428586 483 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 RAC1P2-201ENST00000511164 579 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 AC034114.1-201ENST00000520293 285 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 AC022695.1-201ENST00000522089 237 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 SNRPGP16-201ENST00000533275 226 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 BDH2P1-201ENST00000602288 736 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 AC073410.2-201ENST00000603240 332 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 AC010900.2-201ENST00000604508 210 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 AC096577.2-201ENST00000611455 153 ntBASIC3.81□□□□□ -1.8
CD248Q9HCU0 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
CD248Q9HCU0 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CD248Q9HCU0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CD248Q9HCU0 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.8□□□□□ -1.8
CD248Q9HCU0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
CD248Q9HCU0 CUL1P1-201ENST00000509510 2425 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.8□□□□□ -1.8
CD248Q9HCU0 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CD248Q9HCU0 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CD248Q9HCU0 Y_RNA.274-201ENST00000364714 101 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 RNU6-886P-201ENST00000384319 105 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 RNU6-933P-201ENST00000384424 107 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 RNU6-817P-201ENST00000391083 104 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 RNU1-101P-201ENST00000391171 127 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 EI24P2-201ENST00000397776 1076 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 MIR548I2-201ENST00000408348 149 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 RNU6-1203P-201ENST00000410703 110 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 RNU6-325P-201ENST00000411132 105 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 RPS29P4-201ENST00000414733 161 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.8□□□□□ -1.8
CD248Q9HCU0 BX842559.1-201ENST00000419615 532 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.8□□□□□ -1.8
CD248Q9HCU0 AC006483.1-201ENST00000487308 313 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 SNORA31.1-201ENST00000515993 133 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 SNORA31.5-201ENST00000516190 133 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 RNU6-911P-201ENST00000516523 104 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.8□□□□□ -1.8
CD248Q9HCU0 AC126177.3-201ENST00000551839 688 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 MIR15A-201ENST00000607334 83 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 AP001282.2-201ENST00000616149 309 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.8□□□□□ -1.8
CD248Q9HCU0 MIR7153-201ENST00000637758 57 ntBASIC3.8□□□□□ -1.8
CD248Q9HCU0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.8□□□□□ -1.8
CD248Q9HCU0 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CD248Q9HCU0 AL513302.2-201ENST00000562313 1842 ntBASIC3.79□□□□□ -1.8
CD248Q9HCU0 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CD248Q9HCU0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CD248Q9HCU0 MIR335-201ENST00000362173 94 ntBASIC3.79□□□□□ -1.8
CD248Q9HCU0 Y_RNA.65-201ENST00000362846 100 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 190 ms