Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 RNU6-25P-201ENST00000383873 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-1-201ENST00000383898 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU1-109P-201ENST00000383960 147 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-48P-201ENST00000384161 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-36P-201ENST00000384172 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-4P-201ENST00000384205 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-5P-201ENST00000384238 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-3P-201ENST00000384314 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-16P-201ENST00000384385 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-15P-201ENST00000384534 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 Y_RNA.529-201ENST00000384586 119 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-2-201ENST00000384627 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-29P-201ENST00000384637 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-9-201ENST00000384776 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-33P-201ENST00000384793 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 VN1R36P-201ENST00000414936 291 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AL627311.1-201ENST00000431514 115 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AC107083.1-201ENST00000439643 279 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDH9Q9HC56 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AC011005.2-201ENST00000487324 359 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 SEM1P1-201ENST00000506694 209 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RAC1P5-201ENST00000512182 576 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-1088P-201ENST00000516850 104 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-1183P-201ENST00000517054 60 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AC069113.1-201ENST00000517763 267 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RAB11AP2-201ENST00000545905 639 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 RNU6-6P-201ENST00000606623 107 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 uc_338.5-201ENST00000611839 155 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AC104985.2-201ENST00000620598 500 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AC099654.5-201ENST00000636479 350 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 TPTEP1-208ENST00000636884 213 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 AC112487.2-201ENST00000637950 304 ntBASIC2.81□□□□□ -1.96
PCDH9Q9HC56 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.81□□□□□ -1.96
PCDH9Q9HC56 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
PCDH9Q9HC56 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDH9Q9HC56 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.8□□□□□ -1.96
PCDH9Q9HC56 RNU6-778P-201ENST00000363269 103 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 Y_RNA.166-201ENST00000363730 102 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 Y_RNA.263-201ENST00000364659 114 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 Y_RNA.301-201ENST00000364990 103 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 MIR888-201ENST00000401186 77 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AL513477.1-202ENST00000417061 214 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AC087499.2-201ENST00000432861 149 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 HMGB1P18-201ENST00000438801 619 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDH9Q9HC56 RNA5SP367-201ENST00000516557 118 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 RNU6-703P-201ENST00000516946 107 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AP000889.2-201ENST00000532684 490 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AL391261.3-201ENST00000557194 520 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 RPS3AP23-202ENST00000574601 686 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.8□□□□□ -1.96
PCDH9Q9HC56 FGF7P1-201ENST00000582820 288 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 HMGN2P15-201ENST00000585707 270 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 OR1M4P-201ENST00000589199 287 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AC005261.5-201ENST00000596280 355 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AL355598.1-201ENST00000604169 202 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 APOOP1-201ENST00000604695 592 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AC123912.5-201ENST00000605470 343 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 AC104237.2-201ENST00000612456 443 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 FAM157A-202ENST00000615155 405 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 U2.21-201ENST00000637295 81 ntBASIC2.8□□□□□ -1.96
PCDH9Q9HC56 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PCDH9Q9HC56 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 MTND4P29-201ENST00000503122 1372 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 RNU6-1180P-201ENST00000364935 107 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 RNU6-898P-201ENST00000365627 104 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 RNU6-198P-201ENST00000384258 104 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 MIR34A-201ENST00000385130 110 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 SNORD73A-201ENST00000386062 65 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AC016831.2-201ENST00000417179 352 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 COTL1P1-201ENST00000422309 375 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 MTND3P23-201ENST00000431980 347 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AC112220.1-201ENST00000434628 355 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AC090525.1-201ENST00000479116 478 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AC097462.2-201ENST00000504623 481 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AC087854.1-201ENST00000519706 414 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AL645944.1-201ENST00000603857 493 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AL670379.10-201ENST00000604330 253 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AL670379.9-201ENST00000605428 253 ntBASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
PCDH9Q9HC56 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.78□□□□□ -1.96
PCDH9Q9HC56 RNU6-797P-201ENST00000363101 109 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms