Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 snoU109.1-201ENST00000459339 135 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AC140059.1-201ENST00000489238 361 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AC090572.1-201ENST00000519251 160 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AC008521.1-201ENST00000587471 187 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AL109918.3-201ENST00000603072 338 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AC087045.1-201ENST00000605856 382 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AP001506.1-201ENST00000615444 211 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AC005296.1-201ENST00000616145 209 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 AL359740.1-201ENST00000624340 592 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.23□□□□□ -2.05
RPAP3Q9H6T3 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 FGF7P2-201ENST00000332473 296 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 MIR412-201ENST00000362142 91 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 RNA5SP160-201ENST00000364866 120 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 MIR676-201ENST00000390702 67 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AL512604.1-201ENST00000404812 257 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 RNU2-20P-201ENST00000410425 191 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AC097463.2-201ENST00000421074 142 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 PGBD4P6-201ENST00000421501 610 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 RPS3AP44-201ENST00000425466 790 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AC000111.3-201ENST00000433478 193 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AL136380.1-201ENST00000447970 162 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 RPL22P13-201ENST00000493291 347 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AC008526.1-201ENST00000509149 338 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 MIR548AC-201ENST00000585049 88 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 SEPT7P9-203ENST00000604116 343 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AL670379.10-201ENST00000604330 253 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AL670379.9-201ENST00000605428 253 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 AC093648.1-201ENST00000623546 606 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 HSPA8P4-201ENST00000511877 1920 ntBASIC2.22□□□□□ -2.05
RPAP3Q9H6T3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 MIR10A-201ENST00000385043 110 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 RPL21P90-201ENST00000415692 466 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AL627311.1-201ENST00000431514 115 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 RPS27AP8-201ENST00000452665 445 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 RNA5SP269-201ENST00000459032 137 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 SNORD42A-201ENST00000459584 64 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 BET1P1-201ENST00000482276 359 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AC107032.1-201ENST00000485945 480 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AC116562.3-201ENST00000506136 177 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 RNU5B-3P-201ENST00000516601 115 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AC068587.5-201ENST00000528506 175 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AC087883.1-201ENST00000551882 391 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 MTCYBP33-201ENST00000575007 1130 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AP000942.3-201ENST00000603702 160 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AC009314.1-201ENST00000603871 304 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AC005034.5-201ENST00000604219 466 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 Z84480.1-201ENST00000605131 311 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 MIR98-201ENST00000606724 119 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 FARSBP1-201ENST00000435808 1778 ntBASIC2.21□□□□□ -2.06
RPAP3Q9H6T3 AL354685.2-201ENST00000448218 1447 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 RNU6-179P-201ENST00000363350 107 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 RNU6-116P-201ENST00000384042 109 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 Y_RNA.576-201ENST00000384781 102 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 C1DP2-201ENST00000418167 426 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 EIF1AXP1-201ENST00000419267 435 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 NDUFB1P2-201ENST00000449477 176 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 AL021397.1-201ENST00000451806 248 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 RPL7P43-201ENST00000478876 753 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 AC104564.1-201ENST00000493028 407 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 SNORA18.6-201ENST00000516792 115 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 OR5AL2P-201ENST00000532185 920 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 AC079598.5-201ENST00000547460 117 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 AL158211.1-201ENST00000566763 763 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 AC098848.2-201ENST00000588023 330 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 Z94722.1-201ENST00000604328 474 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 U6.42-201ENST00000618440 107 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 AC092656.1-203ENST00000624134 423 ntBASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
RPAP3Q9H6T3 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 SNORD14B-201ENST00000364533 90 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 RNU4-91P-201ENST00000364778 135 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 EEF1A1P40-201ENST00000412883 573 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 MTND3P17-201ENST00000416968 344 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AL353621.1-201ENST00000418219 243 ntBASIC2.19□□□□□ -2.06
RPAP3Q9H6T3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms