Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VPS11Q9H270 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.74□□□□□ -1.81
VPS11Q9H270 AC058791.1-201ENST00000608412 3198 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS11Q9H270 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
VPS11Q9H270 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS11Q9H270 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS11Q9H270 RNU6-1266P-201ENST00000362794 105 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 RNU6-740P-201ENST00000364734 105 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 RNU6-48P-201ENST00000384161 107 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 RNU6-45P-201ENST00000384471 107 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 RNU6-140P-201ENST00000384566 108 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AL022722.2-201ENST00000402519 180 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AL030996.1-201ENST00000411430 235 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS11Q9H270 AL451062.2-201ENST00000427515 271 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS11Q9H270 AL591704.1-201ENST00000432574 275 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 HSPD1P21-201ENST00000436541 245 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 FABP5P15-201ENST00000453566 214 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AC010618.1-201ENST00000469924 477 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 SNORA31.1-201ENST00000515993 133 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 SNORA31.5-201ENST00000516190 133 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 SNORA31.6-201ENST00000516241 130 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 RNU6-346P-201ENST00000516288 111 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AC087441.2-201ENST00000529141 262 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AC025884.1-201ENST00000556034 378 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AC004584.2-201ENST00000570407 410 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AL160281.1-201ENST00000605307 311 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 SNORA62.6-201ENST00000606322 83 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS11Q9H270 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS11Q9H270 MIR6830-201ENST00000636015 70 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS11Q9H270 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
VPS11Q9H270 AC073073.2-201ENST00000609827 2578 ntBASIC3.73□□□□□ -1.81
VPS11Q9H270 AC005183.1-201ENST00000603687 1979 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
VPS11Q9H270 Y_RNA.83-201ENST00000363005 113 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 SNORD50B-201ENST00000364995 70 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 MIR625-201ENST00000385047 85 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 AC091390.1-201ENST00000433904 331 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 NDUFB1P1-201ENST00000435191 180 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 DAP3P1-201ENST00000441522 278 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS11Q9H270 AC008716.1-201ENST00000511084 513 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 AC113155.1-201ENST00000511141 769 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 AC108043.1-201ENST00000512696 574 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 RNU6-1338P-201ENST00000516328 91 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 RNA5SP164-201ENST00000516533 110 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 RNU6-143P-201ENST00000516942 93 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS11Q9H270 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS11Q9H270 RPS29P30-201ENST00000600975 111 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS11Q9H270 AL591034.3-201ENST00000605511 685 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 BX284668.6-201ENST00000606899 438 ntBASIC3.72□□□□□ -1.81
VPS11Q9H270 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS11Q9H270 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS11Q9H270 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS11Q9H270 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS11Q9H270 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
VPS11Q9H270 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS11Q9H270 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS11Q9H270 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.71□□□□□ -1.81
VPS11Q9H270 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.81
VPS11Q9H270 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS11Q9H270 MIR411-201ENST00000362239 96 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 Y_RNA.533-201ENST00000384596 114 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 Y_RNA.534-201ENST00000384599 112 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 RNA5SP424-201ENST00000390988 115 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 RPL17P36-201ENST00000420302 549 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS11Q9H270 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS11Q9H270 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS11Q9H270 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS11Q9H270 HMGN2P13-201ENST00000476476 274 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS11Q9H270 RNU6-914P-201ENST00000516749 109 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 Y_RNA.713-201ENST00000517013 96 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS11Q9H270 AP002392.1-201ENST00000537692 208 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS11Q9H270 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS11Q9H270 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS11Q9H270 PARP1P2-201ENST00000556806 195 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 TGIF1P1-201ENST00000558095 802 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 AC136932.1-201ENST00000574771 208 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 MIR5701-3-201ENST00000578890 82 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS11Q9H270 MIR5701-1-201ENST00000585138 82 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 RNU6-85P-201ENST00000605989 107 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 AC004832.4-201ENST00000608952 331 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 FTX_3.1-201ENST00000610451 147 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 MIR5701-2-201ENST00000615634 82 ntBASIC3.71□□□□□ -1.82
VPS11Q9H270 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
VPS11Q9H270 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS11Q9H270 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS11Q9H270 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms