Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 AC012435.1-202ENST00000568772 240 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AC119751.7-201ENST00000600494 245 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AL121917.1-203ENST00000605534 577 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AC064807.4-201ENST00000607201 407 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.76□□□□□ -2.13
CDX2Q99626 uc_338.14-201ENST00000613162 166 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AC092140.2-201ENST00000618027 521 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AL353770.2-201ENST00000620024 78 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 AC079248.2-201ENST00000623779 326 ntBASIC1.76□□□□□ -2.13
CDX2Q99626 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
CDX2Q99626 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.76□□□□□ -2.13
CDX2Q99626 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CDX2Q99626 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
CDX2Q99626 RNU1-72P-201ENST00000362976 153 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 RNU6-658P-201ENST00000384606 106 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 SNORA67.6-201ENST00000391093 99 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 RPS12P24-201ENST00000412619 387 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.75□□□□□ -2.13
CDX2Q99626 BTF3L4P1-201ENST00000413813 468 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC1.75□□□□□ -2.13
CDX2Q99626 AL513185.2-201ENST00000425543 193 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.75□□□□□ -2.13
CDX2Q99626 RPL30P4-201ENST00000429309 333 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.75□□□□□ -2.13
CDX2Q99626 RPL37P21-201ENST00000435890 276 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AL021397.1-201ENST00000451806 248 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.75□□□□□ -2.13
CDX2Q99626 SNORD97-201ENST00000459187 142 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.75□□□□□ -2.13
CDX2Q99626 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.75□□□□□ -2.13
CDX2Q99626 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.75□□□□□ -2.13
CDX2Q99626 AC090616.2-202ENST00000584248 222 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.75□□□□□ -2.13
CDX2Q99626 AC008749.1-201ENST00000597650 306 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AP001486.3-201ENST00000615334 372 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AC098657.3-201ENST00000620434 263 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AC091931.1-201ENST00000623488 728 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AC139792.2-201ENST00000624218 587 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 AP000553.5-201ENST00000641933 54 ntBASIC1.75□□□□□ -2.13
CDX2Q99626 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CDX2Q99626 CENPCP1-201ENST00000533085 2578 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 RNU5F-6P-201ENST00000362979 116 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 SNORA16.1-201ENST00000364597 132 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 SNORA75B-201ENST00000384053 137 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 SNORA40C-201ENST00000391285 128 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CDX2Q99626 FCF1P10-201ENST00000407590 479 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 U6atac.2-201ENST00000408644 118 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 RNU2-62P-201ENST00000410868 191 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AL365203.2-201ENST00000423444 196 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 EIF4EP4-201ENST00000424916 578 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.74□□□□□ -2.13
CDX2Q99626 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.74□□□□□ -2.13
CDX2Q99626 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CDX2Q99626 AL031667.1-201ENST00000440222 725 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CDX2Q99626 ZNF114P1-201ENST00000453500 292 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AC025033.1-201ENST00000463883 194 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC1.74□□□□□ -2.13
CDX2Q99626 AC005178.1-201ENST00000508392 440 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AC105313.1-201ENST00000509121 353 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 RNU6-1092P-201ENST00000516955 87 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AP003122.4-201ENST00000530980 758 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.74□□□□□ -2.13
CDX2Q99626 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.74□□□□□ -2.13
CDX2Q99626 MIR5571-201ENST00000577998 113 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.74□□□□□ -2.13
CDX2Q99626 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.74□□□□□ -2.13
CDX2Q99626 AL021997.1-201ENST00000605757 193 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AC103591.3-201ENST00000608684 209 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.74□□□□□ -2.13
CDX2Q99626 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CDX2Q99626 AL603755.1-201ENST00000619504 163 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 AF246928.1-201ENST00000623768 87 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.74□□□□□ -2.13
CDX2Q99626 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
CDX2Q99626 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CDX2Q99626 ELL2P3-201ENST00000457883 1602 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.73□□□□□ -2.13
CDX2Q99626 RNU6-960P-201ENST00000364056 120 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 RNU1-93P-201ENST00000364704 169 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 RNY4P16-201ENST00000364768 94 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 MIR520E-201ENST00000384867 87 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 SNORA26.8-201ENST00000391306 124 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.73□□□□□ -2.13
CDX2Q99626 AL360221.1-201ENST00000445989 335 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 KATNBL1P6-201ENST00000453433 915 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 RNA5SP233-201ENST00000459153 113 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 KLF3P2-201ENST00000465138 268 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 RPS29P1-201ENST00000465274 159 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.73□□□□□ -2.13
CDX2Q99626 AC082651.2-201ENST00000496833 166 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 AC109927.2-201ENST00000506416 303 ntBASIC1.73□□□□□ -2.13
CDX2Q99626 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.73□□□□□ -2.13
CDX2Q99626 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC1.73□□□□□ -2.13
CDX2Q99626 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.73□□□□□ -2.13
CDX2Q99626 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.73□□□□□ -2.13
CDX2Q99626 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.73□□□□□ -2.13
CDX2Q99626 AC022880.1-201ENST00000534017 973 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms