Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RNU1-107P-201ENST00000516617 154 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 RNU6-667P-201ENST00000517186 102 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 EEF1A1P37-201ENST00000522748 715 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AK6P1-201ENST00000540219 478 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC090897.2-201ENST00000581715 130 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 MIR3124-201ENST00000582636 67 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC009977.1-201ENST00000586015 570 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 CLIC4P2-201ENST00000601934 717 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 WISP1-OT1-201ENST00000602893 642 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC025811.1-201ENST00000604312 472 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AL121992.2-201ENST00000606262 256 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 AC019226.2-201ENST00000625973 424 ntBASIC1.89□□□□□ -2.11
RPRD1AQ96P16 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
RPRD1AQ96P16 RNU6-371P-201ENST00000364283 108 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 MIR9-3-201ENST00000385084 90 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AL356432.1-201ENST00000405809 419 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 SUMO2P12-201ENST00000405924 140 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 RNU2-48P-201ENST00000410694 191 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 SNORD56-201ENST00000413522 71 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 PGBD4P6-201ENST00000421501 610 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC104850.1-201ENST00000435940 476 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AL136380.1-201ENST00000447970 162 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC104564.1-201ENST00000493028 407 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 FABP5P5-201ENST00000515537 406 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 SCARNA24.1-201ENST00000516465 137 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 SNORA43.2-201ENST00000516652 128 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 CYCSP27-201ENST00000527643 293 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 MIR548AB-201ENST00000584917 84 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC005771.1-201ENST00000585581 349 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC009159.2-201ENST00000617603 606 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AL391262.2-201ENST00000622466 494 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AL359740.1-201ENST00000624340 592 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC090517.3-201ENST00000625170 141 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.88□□□□□ -2.11
RPRD1AQ96P16 AC241585.2-209ENST00000638217 143 ntBASIC1.88□□□□□ -2.11
RPRD1AQ96P16 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 OR4G2P-201ENST00000328113 903 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 RNU6-655P-201ENST00000362858 107 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 SNORA20.2-201ENST00000383922 131 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 RNU2-23P-201ENST00000410545 195 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 TOMM20P4-201ENST00000427861 435 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AC000111.3-201ENST00000433478 193 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 MTATP6P16-201ENST00000434543 526 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 ZNF736P8Y-201ENST00000451913 669 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 RPS29P11-201ENST00000496507 171 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AC107393.1-201ENST00000512403 346 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 RNU2-46P-201ENST00000517038 113 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 BNIP3P6-201ENST00000549284 499 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AC090616.2-202ENST00000584248 222 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AC012065.4-201ENST00000602445 679 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AC012360.2-201ENST00000609349 391 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AC131159.1-201ENST00000621854 213 ntBASIC1.87□□□□□ -2.11
RPRD1AQ96P16 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.87□□□□□ -2.11
RPRD1AQ96P16 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
RPRD1AQ96P16 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
RPRD1AQ96P16 SNORA26.9-201ENST00000391322 122 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 Y_RNA.598-201ENST00000410480 95 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 RNA5SP111-201ENST00000411386 101 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 RPL21P90-201ENST00000415692 466 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AC074117.2-201ENST00000417130 397 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 Z99497.1-201ENST00000421282 135 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 RPL23AP6-201ENST00000446637 472 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AL137159.1-201ENST00000452808 512 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.86□□□□□ -2.11
RPRD1AQ96P16 RNU7-125P-201ENST00000458760 62 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AC006512.1-201ENST00000468816 291 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 RPL30P6-201ENST00000475925 342 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 RNU6-685P-201ENST00000517088 95 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AP003392.2-201ENST00000527269 208 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.86□□□□□ -2.11
RPRD1AQ96P16 OR5AL2P-201ENST00000532185 920 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AP000763.2-201ENST00000540641 163 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AC007375.1-201ENST00000554513 578 ntBASIC1.86□□□□□ -2.11
RPRD1AQ96P16 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms