Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AC118469.1-201ENST00000442943 488 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.87□□□□□ -2.11
USP47Q96K76 PSPHP1-201ENST00000450062 261 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.87□□□□□ -2.11
USP47Q96K76 SNORA4.4-201ENST00000515921 135 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 RNA5SP220-201ENST00000516298 104 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 RNU2-19P-201ENST00000517288 84 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 AC011979.2-201ENST00000527568 352 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 PSMA3P-201ENST00000555485 635 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 AC092325.1-201ENST00000566449 554 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 AP005136.1-201ENST00000579765 429 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.87□□□□□ -2.11
USP47Q96K76 AP001486.3-201ENST00000615334 372 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 AP003400.5-201ENST00000624827 617 ntBASIC1.87□□□□□ -2.11
USP47Q96K76 RNU6-1032P-201ENST00000384100 107 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 RN7SKP51-201ENST00000410781 304 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AC127391.1-201ENST00000411737 98 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.86□□□□□ -2.11
USP47Q96K76 VN1R108P-201ENST00000431580 830 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 RPL23AP30-201ENST00000432419 501 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.86□□□□□ -2.11
USP47Q96K76 AC107032.1-201ENST00000485945 480 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AF131216.2-201ENST00000512316 564 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.86□□□□□ -2.11
USP47Q96K76 AC107953.1-201ENST00000522216 297 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 ZNF519P3-201ENST00000557158 1032 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.86□□□□□ -2.11
USP47Q96K76 AC007229.1-201ENST00000590455 412 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AL713866.2-201ENST00000603579 219 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AP000811.1-201ENST00000603803 651 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AC018714.1-201ENST00000605028 208 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 NDUFA8P1-201ENST00000605525 367 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AC018638.7-201ENST00000605836 1114 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AC087045.1-201ENST00000605856 382 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AC092953.2-201ENST00000608000 699 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AC017037.3-201ENST00000625016 472 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.86□□□□□ -2.11
USP47Q96K76 OR4G1P-203ENST00000641984 1631 ntBASIC1.86□□□□□ -2.11
USP47Q96K76 SNORD114-19-201ENST00000363072 75 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 SNORD113-6-201ENST00000363345 75 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 MIR17-201ENST00000385012 84 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 MIR95-201ENST00000385072 81 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.85□□□□□ -2.11
USP47Q96K76 AC138623.1-201ENST00000418060 216 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 RPS6P15-201ENST00000431996 751 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AL606662.1-201ENST00000445763 553 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AC003071.1-201ENST00000451219 789 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AL583843.1-201ENST00000456070 346 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.85□□□□□ -2.11
USP47Q96K76 AC117503.1-201ENST00000472241 394 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 RNU2-44P-201ENST00000516795 194 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 RNA5SP480-201ENST00000516840 109 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.85□□□□□ -2.11
USP47Q96K76 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.85□□□□□ -2.11
USP47Q96K76 AC233702.2-202ENST00000562547 291 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AC096772.1-201ENST00000609146 564 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 TUSC7.1-201ENST00000610969 165 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AC016597.2-201ENST00000613256 341 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 MIR6734-201ENST00000621166 68 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AC024940.5-201ENST00000622889 474 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AC092192.1-201ENST00000633154 1018 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 OR4G3P-201ENST00000633500 913 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
USP47Q96K76 AL445523.1-201ENST00000451184 1362 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 SNORA25B-201ENST00000365507 128 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 RNU6-395P-201ENST00000365662 106 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 RNU6-203P-201ENST00000384038 104 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 SNORA75B-201ENST00000384053 137 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 RNU6-190P-201ENST00000384154 102 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 RPS20P15-201ENST00000412792 311 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.85□□□□□ -2.11
USP47Q96K76 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.85□□□□□ -2.11
USP47Q96K76 snoU109.2-201ENST00000459316 135 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC1.85□□□□□ -2.11
USP47Q96K76 MTCYBP35-201ENST00000503630 1137 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.85□□□□□ -2.11
USP47Q96K76 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC1.85□□□□□ -2.11
USP47Q96K76 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.85□□□□□ -2.11
USP47Q96K76 OR5B19P-201ENST00000531766 928 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.85□□□□□ -2.11
USP47Q96K76 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.85□□□□□ -2.11
USP47Q96K76 MIR4529-201ENST00000578110 78 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 RPL30P11-203ENST00000598995 310 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AL158032.1-201ENST00000605401 106 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 AC126118.1-201ENST00000607744 628 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.85□□□□□ -2.11
USP47Q96K76 AC092656.1-203ENST00000624134 423 ntBASIC1.85□□□□□ -2.11
USP47Q96K76 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
USP47Q96K76 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
USP47Q96K76 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
USP47Q96K76 Y_RNA.112-201ENST00000363250 102 ntBASIC1.84□□□□□ -2.12
USP47Q96K76 RNU6-533P-201ENST00000384144 107 ntBASIC1.84□□□□□ -2.12
USP47Q96K76 SNORA40.6-201ENST00000391153 128 ntBASIC1.84□□□□□ -2.12
USP47Q96K76 AL591034.2-201ENST00000402839 359 ntBASIC1.84□□□□□ -2.12
USP47Q96K76 AL365338.1-201ENST00000422282 858 ntBASIC1.84□□□□□ -2.12
USP47Q96K76 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.84□□□□□ -2.12
USP47Q96K76 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.84□□□□□ -2.12
USP47Q96K76 AC112204.1-201ENST00000502591 103 ntBASIC1.84□□□□□ -2.12
USP47Q96K76 SCARNA1-201ENST00000517138 166 ntBASIC1.84□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms