Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC022616.8-201ENST00000533569 253 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.29□□□□□ -2.04
VMP1Q96GC9 AC064872.1-201ENST00000604823 1072 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 Z99289.3-201ENST00000605586 594 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 AC006566.1-201ENST00000608943 513 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 AC004908.3-201ENST00000610248 625 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.29□□□□□ -2.04
VMP1Q96GC9 SNORD115-3-201ENST00000363100 82 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 RNU6-715P-201ENST00000365204 103 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 MIR1-2-201ENST00000384961 85 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 MIR29C-201ENST00000385231 88 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 BTF3P7-201ENST00000407097 488 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 BX295541.1-201ENST00000417774 250 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 AL596276.1-201ENST00000434465 418 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC007969.2-201ENST00000441891 191 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 MTND2P4-201ENST00000445034 1004 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC079448.1-201ENST00000449377 373 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
VMP1Q96GC9 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 AL162395.1-201ENST00000457882 422 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 MTND2P33-201ENST00000506452 1031 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 RPL23AP94-201ENST00000512518 302 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 SNORD27.1-201ENST00000516319 72 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 RNA5SP24-201ENST00000516478 95 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 RNA5SP503-201ENST00000517047 117 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC078814.3-201ENST00000553036 491 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC091135.1-201ENST00000585943 307 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 SEPT7P9-203ENST00000604116 343 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 AC008945.2-201ENST00000606056 604 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 AL359314.1-201ENST00000616913 261 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 AL132822.1-201ENST00000617063 513 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 Z69720.2-201ENST00000624755 279 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.28□□□□□ -2.04
VMP1Q96GC9 U4.7-201ENST00000638126 106 ntBASIC2.28□□□□□ -2.04
VMP1Q96GC9 RNU6-944P-201ENST00000364023 107 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 Y_RNA.324-201ENST00000365165 102 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 RNU6-301P-201ENST00000384277 107 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 MIR544A-201ENST00000384855 91 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 AL353689.1-201ENST00000438895 199 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 AC010486.2-201ENST00000505572 483 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 Y_RNA.717-201ENST00000517106 92 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 MIR4435-1-201ENST00000582552 80 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 AC078795.2-201ENST00000602835 1252 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 APOOP1-201ENST00000604695 592 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 AC005296.1-201ENST00000616145 209 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 uc_338.11-201ENST00000619132 160 ntBASIC2.27□□□□□ -2.05
VMP1Q96GC9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
VMP1Q96GC9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
VMP1Q96GC9 Y_RNA.169-201ENST00000363745 96 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 SNORA41-201ENST00000384675 132 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 RNU6-1245P-201ENST00000411130 106 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AC009963.1-201ENST00000417265 157 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AL590556.1-201ENST00000423231 483 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 SRIP2-201ENST00000428470 166 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 WARS2P1-201ENST00000429678 537 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.26□□□□□ -2.05
VMP1Q96GC9 AL122001.1-201ENST00000457027 370 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 PRELID3BP1-201ENST00000457142 540 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AC022364.2-201ENST00000457963 554 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AC234781.5-201ENST00000508429 271 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AP001893.2-201ENST00000526949 202 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AC018630.3-201ENST00000542637 96 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AP002770.2-201ENST00000543613 532 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AC145350.1-201ENST00000567426 208 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AC012414.6-201ENST00000568241 401 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 AC243960.4-201ENST00000600532 288 ntBASIC2.26□□□□□ -2.05
VMP1Q96GC9 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
VMP1Q96GC9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
VMP1Q96GC9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.26□□□□□ -2.05
VMP1Q96GC9 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.25□□□□□ -2.05
VMP1Q96GC9 RNU6-1029P-201ENST00000384109 107 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 RNU6-456P-201ENST00000384493 107 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 RNU6-1222P-201ENST00000384615 107 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 SNORA67.4-201ENST00000384688 142 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
VMP1Q96GC9 RNU4-46P-201ENST00000410818 138 ntBASIC2.25□□□□□ -2.05
VMP1Q96GC9 HMGB3P2-201ENST00000411913 584 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms