Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.45□□□□□ -2.02
VPS33AQ96AX1 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.45□□□□□ -2.02
VPS33AQ96AX1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
VPS33AQ96AX1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.45□□□□□ -2.02
VPS33AQ96AX1 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
VPS33AQ96AX1 RNU6-212P-201ENST00000362642 104 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 Y_RNA.40-201ENST00000362645 93 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 RNU6-266P-201ENST00000364225 107 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 RNU6-259P-201ENST00000383999 107 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 RPLP0P7-201ENST00000416050 667 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 IFNA11P-201ENST00000446352 526 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 AC011753.1-201ENST00000451001 220 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS33AQ96AX1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.44□□□□□ -2.02
VPS33AQ96AX1 S100A11P2-201ENST00000467589 312 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 RNU6-377P-201ENST00000515965 102 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 AC022880.1-201ENST00000534017 973 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 CYCSP26-201ENST00000534107 320 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 AC009127.3-201ENST00000570531 403 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.44□□□□□ -2.02
VPS33AQ96AX1 AC091135.1-201ENST00000585943 307 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.44□□□□□ -2.02
VPS33AQ96AX1 uc_338.34-201ENST00000617467 174 ntBASIC2.44□□□□□ -2.02
VPS33AQ96AX1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS33AQ96AX1 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
VPS33AQ96AX1 Y_RNA.481-201ENST00000384373 102 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 RNU6-1222P-201ENST00000384615 107 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 MIR144-201ENST00000384886 86 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 RNU6-1245P-201ENST00000411130 106 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AIMP1P2-201ENST00000425294 312 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AL606489.2-201ENST00000433886 234 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC013470.1-201ENST00000453438 462 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC105313.1-201ENST00000509121 353 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 MTND3P5-201ENST00000512798 333 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 RN7SKP256-201ENST00000517201 314 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 MTND4P7-201ENST00000523876 130 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AP001893.2-201ENST00000526949 202 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC118273.2-201ENST00000532092 465 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 MIR3944-201ENST00000581277 108 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 MIR5195-201ENST00000583555 115 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 VN1R107P-201ENST00000601784 209 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AL670379.2-201ENST00000604983 252 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC002044.1-201ENST00000606707 158 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC093732.2-201ENST00000607950 274 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC104073.3-201ENST00000610942 955 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 AC139792.3-201ENST00000623525 224 ntBASIC2.43□□□□□ -2.02
VPS33AQ96AX1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
VPS33AQ96AX1 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 SNORA3A-201ENST00000364113 130 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 RNU6-1322P-201ENST00000364309 107 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 U8.8-201ENST00000365399 135 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 MIR23B-201ENST00000384832 97 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 AL162578.1-201ENST00000406202 378 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS33AQ96AX1 DNAJC19P4-201ENST00000440115 345 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS33AQ96AX1 RPL39P29-201ENST00000447779 157 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 RNU6-261P-201ENST00000459506 102 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 AC083798.1-201ENST00000472671 131 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 RPL30P12-201ENST00000474666 353 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.42□□□□□ -2.02
VPS33AQ96AX1 MTND2P33-201ENST00000506452 1031 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS33AQ96AX1 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS33AQ96AX1 HMGB3P3-201ENST00000510526 400 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.42□□□□□ -2.02
VPS33AQ96AX1 PRELID2P1-201ENST00000552837 301 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.42□□□□□ -2.02
VPS33AQ96AX1 BNIP3P16-201ENST00000589779 534 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 AC123912.5-201ENST00000605470 343 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 MIR92B-201ENST00000607575 96 ntBASIC2.42□□□□□ -2.02
VPS33AQ96AX1 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS33AQ96AX1 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.42□□□□□ -2.02
VPS33AQ96AX1 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS33AQ96AX1 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
VPS33AQ96AX1 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
VPS33AQ96AX1 AL606923.1-201ENST00000406616 190 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 USP9YP14-201ENST00000430663 563 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 VN1R108P-201ENST00000431580 830 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 AC011825.1-201ENST00000484967 388 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 RPL30P1-201ENST00000488676 339 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS33AQ96AX1 IGLV3-17-201ENST00000519099 244 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 AC115990.1-201ENST00000526957 301 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.41□□□□□ -2.02
VPS33AQ96AX1 CYCSP27-201ENST00000527643 293 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 AC104383.1-201ENST00000530297 370 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 AC243972.3-201ENST00000539655 198 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 MIR5583-1-201ENST00000580941 59 ntBASIC2.41□□□□□ -2.02
VPS33AQ96AX1 MIR4424-201ENST00000585257 86 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms