Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-858P-201ENST00000362436 107 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-181P-201ENST00000363225 107 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RNU4-91P-201ENST00000364778 135 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-1303P-201ENST00000364841 107 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RNA5SP126-201ENST00000365092 109 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 SNORA75-201ENST00000384158 137 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-72P-201ENST00000384285 79 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC090960.1-201ENST00000421072 306 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 MTCO2P34-201ENST00000421994 607 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 MTCYBP5-201ENST00000423752 1135 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 BX276092.3-201ENST00000424182 230 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 MTND4P32-201ENST00000437189 1237 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AL136380.1-201ENST00000447970 162 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RPS29P15-201ENST00000458329 171 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RPL36AP48-201ENST00000485521 314 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RPS29P21-201ENST00000496272 170 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC104806.1-201ENST00000508720 308 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC010486.3-201ENST00000511602 785 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 Y_RNA.687-201ENST00000516558 91 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RNU2-44P-201ENST00000516795 194 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-445P-201ENST00000516949 107 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-410P-201ENST00000517006 107 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 MIR4528-201ENST00000577763 90 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 MIR3682-201ENST00000581338 84 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC007229.1-201ENST00000590455 412 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC025165.5-201ENST00000602802 578 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AL590229.1-201ENST00000603497 542 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC025811.1-201ENST00000604312 472 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AL670379.10-201ENST00000604330 253 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AL670379.9-201ENST00000605428 253 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 uc_338.14-201ENST00000613162 166 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC009233.1-201ENST00000616477 371 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC099842.1-201ENST00000619919 596 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AC024581.2-201ENST00000619986 252 ntBASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.57□□□□□ -2.16
RTN4IP1Q8WWV3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 MIR412-201ENST00000362142 91 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 SNORA16.1-201ENST00000364597 132 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 Y_RNA.359-201ENST00000365498 102 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-748P-201ENST00000384648 107 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-550P-201ENST00000391057 101 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC068050.1-201ENST00000394891 380 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 MIR1302-8-201ENST00000408342 128 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 RNU2-20P-201ENST00000410425 191 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC003685.2-201ENST00000422795 395 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 GPR143P-201ENST00000434155 205 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 KATNBL1P3-201ENST00000443475 909 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 MTCO1P19-201ENST00000443487 500 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 RPL32P28-201ENST00000443577 397 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC104058.1-201ENST00000448028 297 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC080013.2-201ENST00000460866 323 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 HMGB3P17-201ENST00000504195 649 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC117532.1-201ENST00000514638 323 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 SNORA31.25-201ENST00000517242 134 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC118273.2-201ENST00000532092 465 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC024614.2-201ENST00000577584 372 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 MIR4775-201ENST00000581168 75 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 SNRPGP19-201ENST00000603826 189 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AC008147.4-201ENST00000617570 1204 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 RBBP8P1-201ENST00000449447 1844 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 AL354685.2-201ENST00000448218 1447 ntBASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RTN4IP1Q8WWV3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RTN4IP1Q8WWV3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.55□□□□□ -2.16
RTN4IP1Q8WWV3 ELL2P3-201ENST00000457883 1602 ntBASIC1.55□□□□□ -2.16
RTN4IP1Q8WWV3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.55□□□□□ -2.16
RTN4IP1Q8WWV3 MTND5P30-201ENST00000452896 1731 ntBASIC1.55□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-1032P-201ENST00000384100 107 ntBASIC1.55□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-1029P-201ENST00000384109 107 ntBASIC1.55□□□□□ -2.16
RTN4IP1Q8WWV3 RNU6-456P-201ENST00000384493 107 ntBASIC1.55□□□□□ -2.16
RTN4IP1Q8WWV3 AC019129.1-201ENST00000403786 261 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms