Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 SNORA67.4-201ENST00000384688 142 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 MIR518D-201ENST00000385014 87 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 RNU2-63P-201ENST00000410792 194 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AL353621.1-201ENST00000418219 243 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 MTCYBP5-201ENST00000423752 1135 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AL606489.2-201ENST00000433886 234 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 RPL7P54-201ENST00000438336 674 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 RNU7-182P-201ENST00000459009 62 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 RPS29P25-201ENST00000481709 171 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC011005.2-201ENST00000487324 359 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC018437.1-201ENST00000492214 406 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC108078.2-201ENST00000510750 236 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 RN7SKP219-201ENST00000516825 296 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC109635.3-201ENST00000529536 185 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.46□□□□□ -2.02
RTL3Q8N8U3 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC008521.1-201ENST00000587471 187 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC008752.3-201ENST00000588113 712 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC012409.4-201ENST00000612923 249 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC007014.2-201ENST00000615581 479 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 uc_338.11-201ENST00000619132 160 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC024581.2-201ENST00000619986 252 ntBASIC2.46□□□□□ -2.02
RTL3Q8N8U3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.46□□□□□ -2.02
RTL3Q8N8U3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.46□□□□□ -2.02
RTL3Q8N8U3 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RTL3Q8N8U3 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 RNU6-858P-201ENST00000362436 107 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 SNORA62.1-201ENST00000364287 154 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 RNU4-12P-201ENST00000365233 139 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 U8.8-201ENST00000365399 135 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 RNU6-483P-201ENST00000384088 108 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 RNU1-138P-201ENST00000384093 164 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 RBMX2P4-201ENST00000441256 376 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC073415.1-201ENST00000449240 153 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC012308.1-201ENST00000451232 178 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AL583843.1-201ENST00000456070 346 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 RNU7-63P-201ENST00000459054 62 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC112771.1-201ENST00000463581 102 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 UBE2DNL-203ENST00000474922 222 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 MTAPP1-201ENST00000489154 819 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC092436.1-201ENST00000506450 503 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 HMGB3P3-201ENST00000510526 400 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC026436.1-201ENST00000510537 270 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 RNU6-718P-201ENST00000516166 105 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AP000889.1-201ENST00000530968 660 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC021269.2-201ENST00000532318 330 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 MIR4703-201ENST00000577728 79 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 SNORA59B-202ENST00000578183 701 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC087045.1-201ENST00000605856 382 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 RNU6-91P-201ENST00000607774 107 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC138627.2-201ENST00000624202 601 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.45□□□□□ -2.02
RTL3Q8N8U3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.45□□□□□ -2.02
RTL3Q8N8U3 Z82209.1-201ENST00000422141 2135 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 MIR6073-201ENST00000352083 89 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 RNU6-1090P-201ENST00000364065 94 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 SNORA25.6-201ENST00000364121 118 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 RNU6-1283P-201ENST00000365314 105 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 RNU6-1029P-201ENST00000384109 107 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 Y_RNA.576-201ENST00000384781 102 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 SNORD115-47-201ENST00000391226 86 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 MIR1277-201ENST00000408536 78 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 MTND1P18-201ENST00000448191 573 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 RN7SL636P-201ENST00000497504 294 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 Y_RNA.704-201ENST00000516851 102 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 OR5AL2P-201ENST00000532185 920 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
RTL3Q8N8U3 AL162413.1-201ENST00000603198 110 ntBASIC2.44□□□□□ -2.02
RTL3Q8N8U3 SNORD14A-201ENST00000606526 91 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms