Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AC010620.2-201ENST00000600135 313 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AC002044.1-201ENST00000606707 158 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 AC011890.2-201ENST00000613393 294 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 Z69720.2-201ENST00000624755 279 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 MTND5P30-201ENST00000452896 1731 ntBASIC3.09□□□□□ -1.91
HERC6Q8IVU3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HERC6Q8IVU3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HERC6Q8IVU3 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
HERC6Q8IVU3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
HERC6Q8IVU3 Y_RNA.303-201ENST00000364998 94 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 Y_RNA.378-201ENST00000365652 113 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 FTH1P15-201ENST00000406984 280 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 Y_RNA.604-201ENST00000410574 102 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.08□□□□□ -1.92
HERC6Q8IVU3 AC093151.1-201ENST00000427711 313 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 SAR1AP4-201ENST00000429225 591 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 HMGB1P31-201ENST00000437242 427 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 AC124916.1-201ENST00000444020 547 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.08□□□□□ -1.92
HERC6Q8IVU3 UBL5P3-201ENST00000475112 231 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 RPL21P93-201ENST00000480465 489 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.08□□□□□ -1.92
HERC6Q8IVU3 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 SNORA25.17-201ENST00000517184 124 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 AC087854.1-201ENST00000519706 414 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 AC023050.3-201ENST00000541142 333 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 CR383656.8-201ENST00000549046 145 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.08□□□□□ -1.92
HERC6Q8IVU3 RNU6-91P-201ENST00000607774 107 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 AC096772.1-201ENST00000609146 564 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
HERC6Q8IVU3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.08□□□□□ -1.92
HERC6Q8IVU3 AC138915.1-201ENST00000565427 1685 ntBASIC3.08□□□□□ -1.92
HERC6Q8IVU3 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 AC121333.1-201ENST00000567488 2709 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 HAUS6P2-201ENST00000433254 2404 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 OR56A5-201ENST00000340110 738 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 Y_RNA.100-201ENST00000363141 102 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 Y_RNA.157-201ENST00000363638 102 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 SNORA51.4-201ENST00000364993 124 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 Y_RNA.373-201ENST00000365600 103 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 AL138827.1-201ENST00000402666 306 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 AL513043.1-201ENST00000439124 535 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 AL353572.1-201ENST00000442490 417 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 RPL22P13-201ENST00000493291 347 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 TBCAP3-201ENST00000512475 312 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 OR1M4P-201ENST00000589199 287 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 AL355073.2-201ENST00000612106 557 ntBASIC3.07□□□□□ -1.92
HERC6Q8IVU3 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.07□□□□□ -1.92
HERC6Q8IVU3 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-37P-201ENST00000362692 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-11P-201ENST00000364234 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU1-112P-201ENST00000364401 164 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-25P-201ENST00000383873 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-1-201ENST00000383898 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-48P-201ENST00000384161 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-36P-201ENST00000384172 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-4P-201ENST00000384205 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-5P-201ENST00000384238 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-3P-201ENST00000384314 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-16P-201ENST00000384385 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-15P-201ENST00000384534 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-2-201ENST00000384627 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-29P-201ENST00000384637 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-9-201ENST00000384776 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-33P-201ENST00000384793 107 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-332P-201ENST00000391193 108 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RN7SKP58-201ENST00000411010 305 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 AC009296.1-201ENST00000443146 155 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU7-138P-201ENST00000459479 64 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 AC007547.1-201ENST00000462177 490 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 MED28P2-201ENST00000475771 317 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-377P-201ENST00000515965 102 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 SNORA19.2-201ENST00000516013 114 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU5B-3P-201ENST00000516601 115 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 SNORA43.2-201ENST00000516652 128 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 AP000763.2-201ENST00000540641 163 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 AP002770.2-201ENST00000543613 532 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.06□□□□□ -1.92
HERC6Q8IVU3 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.06□□□□□ -1.92
HERC6Q8IVU3 RNU6-6P-201ENST00000606623 107 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms