Protein–RNA interactions for Protein: Q6P9F5

TRIM40, Tripartite motif-containing protein 40, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40Q6P9F5 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 AC087883.1-201ENST00000551882 391 ntBASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 AC093249.1-201ENST00000567049 203 ntBASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 AC109446.2-201ENST00000567872 497 ntBASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 MIR5692A1-201ENST00000580523 69 ntBASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 AL603755.1-201ENST00000619504 163 ntBASIC1.79□□□□□ -2.12
TRIM40Q6P9F5 RNU1-23P-201ENST00000363361 144 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 Y_RNA.576-201ENST00000384781 102 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 SNORA40.3-201ENST00000390964 122 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 HMGN2P38-201ENST00000423806 265 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 CALM2P2-201ENST00000428512 440 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 HMGN2P3-201ENST00000433603 273 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 HMGN2P5-201ENST00000436882 273 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AL033528.1-201ENST00000453780 140 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 MTCYBP1-201ENST00000454315 1119 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AC018868.1-201ENST00000491307 315 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 SNORA4.4-201ENST00000515921 135 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 SNORA43.2-201ENST00000516652 128 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 RNA5SP137-201ENST00000516833 135 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 RNU6-410P-201ENST00000517006 107 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 RNU2-19P-201ENST00000517288 84 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AP003072.2-201ENST00000527756 676 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 LRRC34P1-201ENST00000542742 915 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 IMMP1LP2-201ENST00000552954 492 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AC090897.2-201ENST00000581715 130 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 MIR4448-201ENST00000584360 86 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AC008749.1-201ENST00000597650 306 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 APOOP1-201ENST00000604695 592 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AC009318.2-201ENST00000610917 651 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AP001506.1-201ENST00000615444 211 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 RMST_4.1-201ENST00000616886 107 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AC091304.6-201ENST00000619761 202 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 AC098657.3-201ENST00000620434 263 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 uc_338.20-201ENST00000621563 178 ntBASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.78□□□□□ -2.12
TRIM40Q6P9F5 FARSBP1-201ENST00000435808 1778 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 MTND5P17-201ENST00000418405 1603 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 SNORD115-7-201ENST00000365306 82 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 Y_RNA.367-201ENST00000365544 101 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 MT-TH-201ENST00000387441 69 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 RAP1BP3-201ENST00000407180 549 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 MIR1289-2-201ENST00000408360 111 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 RNU6-195P-201ENST00000411352 109 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 ISCA1P6-201ENST00000427740 390 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 TOMM20P4-201ENST00000427861 435 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC000111.3-201ENST00000433478 193 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AL445567.1-201ENST00000439121 144 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC079781.2-201ENST00000446424 169 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 GAPDHP17-201ENST00000449858 1001 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC107032.1-201ENST00000485945 480 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 RNA5SP182-201ENST00000516064 82 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 RNU6-586P-201ENST00000517265 104 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC034114.1-201ENST00000520293 285 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC007375.1-201ENST00000554513 578 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC233702.2-202ENST00000562547 291 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 MIR4529-201ENST00000578110 78 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC098848.2-201ENST00000588023 330 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 Z99289.3-201ENST00000605586 594 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC022202.1-201ENST00000613515 211 ntBASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
TRIM40Q6P9F5 AC009487.4-201ENST00000624969 3585 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 RNU6-529P-201ENST00000363383 104 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 SNORA16.1-201ENST00000364597 132 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 MIR583-201ENST00000384846 75 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 RNA5SP390-201ENST00000410191 113 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 RNU2-23P-201ENST00000410545 195 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 RNU2-40P-201ENST00000410833 196 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 MTND3P17-201ENST00000416968 344 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 AC074117.2-201ENST00000417130 397 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 HMGN2P19-201ENST00000425149 265 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 GPR143P-201ENST00000434155 205 ntBASIC1.76□□□□□ -2.13
TRIM40Q6P9F5 HMGB1P31-201ENST00000437242 427 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms