Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AL591043.1-201ENST00000432461 424 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC009969.1-201ENST00000438726 172 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 MRPL42P6-201ENST00000486397 371 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC096576.1-201ENST00000489014 359 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC090096.1-201ENST00000489168 390 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC093663.1-201ENST00000497190 394 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 RNU6-470P-201ENST00000515954 104 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 RNU6-581P-201ENST00000516214 105 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 SCARNA16.2-201ENST00000516520 172 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 ELOCP31-201ENST00000540463 467 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 BNIP3P16-201ENST00000589779 534 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC022432.1-201ENST00000595739 310 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC078795.3-201ENST00000602913 472 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 AC019176.2-201ENST00000611579 315 ntBASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.38□□□□□ -1.87
KHDC1Q4VXA5 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 SNORA63.1-201ENST00000362493 131 ntBASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 MIR521-1-201ENST00000384902 87 ntBASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 AL137792.2-201ENST00000443484 235 ntBASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 CYCSP35-201ENST00000451978 304 ntBASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 RPL23AP62-201ENST00000463396 453 ntBASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 AC092185.1-201ENST00000491371 97 ntBASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 SMURF2P1-201ENST00000514992 481 ntBASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 SNORA31.18-201ENST00000517043 134 ntBASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 MTCO3P13-201ENST00000577757 781 ntBASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.37□□□□□ -1.87
KHDC1Q4VXA5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 RNU6-1115P-201ENST00000362490 106 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 RNU6-227P-201ENST00000362865 103 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 RNU6-490P-201ENST00000362985 107 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 Y_RNA.202-201ENST00000364083 110 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 SNORD116-20-201ENST00000384529 92 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 MIR7-3-201ENST00000384898 110 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AC074117.2-201ENST00000417130 397 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 EIF4EP2-201ENST00000422816 654 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 RPS15AP5-201ENST00000436276 388 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 SETP5-201ENST00000437270 562 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AC011816.1-201ENST00000441346 546 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AL118496.2-201ENST00000448300 230 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 MIR2053-201ENST00000459295 91 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 CENPBD1P1-201ENST00000464061 469 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 SNORD19.2-201ENST00000516978 73 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 Y_RNA.711-201ENST00000516993 102 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 RNU6-264P-201ENST00000517134 104 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AC022634.1-201ENST00000520765 532 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AC245166.1-201ENST00000521012 253 ntBASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
KHDC1Q4VXA5 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 MIR208A-201ENST00000362287 71 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 Y_RNA.463-201ENST00000384271 102 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 RN7SKP111-201ENST00000410349 271 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AP000275.1-201ENST00000411943 390 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 BX276092.3-201ENST00000424182 230 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 RPL23AP50-201ENST00000434149 455 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AL161651.1-201ENST00000440882 223 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AL031183.1-201ENST00000457667 207 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 RPS29P27-201ENST00000463711 170 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 HMGN2P13-201ENST00000476476 274 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AL163540.1-201ENST00000485382 386 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AC068781.1-201ENST00000488231 618 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 SNORA31.21-201ENST00000517180 77 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AC009163.5-201ENST00000575421 637 ntBASIC3.35□□□□□ -1.87
KHDC1Q4VXA5 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms