Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
PDS5AQ29RF7 Y_RNA.33-201ENST00000362591 102 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 SNORA25.6-201ENST00000364121 118 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 RNU6-395P-201ENST00000365662 106 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 SNORA32.2-201ENST00000384049 122 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 SNORA70B-201ENST00000384210 135 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 RNU6-140P-201ENST00000384566 108 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
PDS5AQ29RF7 RNU6-1009P-201ENST00000390996 107 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AL139095.1-201ENST00000404326 391 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 RN7SKP32-201ENST00000410167 303 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 RNU2-41P-201ENST00000410991 178 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AL512844.2-201ENST00000433990 593 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 SNRPEP8-201ENST00000442866 260 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 PRPS1P1-201ENST00000445305 876 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 RNU6-329P-201ENST00000459618 107 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 DYNLL1P5-201ENST00000467158 270 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC026436.1-201ENST00000510537 270 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC008716.1-201ENST00000511084 513 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.89□□□□□ -1.95
PDS5AQ29RF7 RNA5SP165-201ENST00000517142 115 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC022690.1-201ENST00000526681 550 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC021269.2-201ENST00000532318 330 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC087241.2-201ENST00000535801 324 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.89□□□□□ -1.95
PDS5AQ29RF7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC092747.3-201ENST00000603769 301 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC008962.1-201ENST00000605729 304 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 FTX_3.1-201ENST00000610451 147 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC093913.1-201ENST00000614178 329 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC099654.5-201ENST00000636479 350 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 AC022336.2-201ENST00000568966 2538 ntBASIC2.89□□□□□ -1.95
PDS5AQ29RF7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
PDS5AQ29RF7 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 RNU6-831P-201ENST00000384548 107 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 EIF4E2P1-201ENST00000393781 255 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 RNU2-68P-201ENST00000410878 191 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 RN7SKP284-201ENST00000411002 343 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 MTND3P8-201ENST00000412909 339 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AL353621.1-201ENST00000418219 243 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 NDUFA5P4-201ENST00000436704 385 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 SNRPEP9-201ENST00000436794 238 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 HIGD1AP2-201ENST00000446367 280 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AP000705.1-201ENST00000454567 350 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 MTND1P11-201ENST00000456661 876 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 RNA5SP310-201ENST00000459084 116 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 RNU7-66P-201ENST00000459469 62 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC079140.5-201ENST00000507882 310 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 BTF3P12-201ENST00000519620 469 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC004486.1-201ENST00000546846 233 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC091135.1-201ENST00000585943 307 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC073539.2-201ENST00000597113 165 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 VN1R80P-201ENST00000597126 338 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC116312.1-201ENST00000606841 314 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC046143.2-201ENST00000609789 160 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 DUSP12P1-201ENST00000612874 516 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 AC068831.7-201ENST00000616954 363 ntBASIC2.88□□□□□ -1.95
PDS5AQ29RF7 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
PDS5AQ29RF7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 SNORD81.2-201ENST00000365153 76 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 Y_RNA.480-201ENST00000384364 102 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 SNORA1.3-201ENST00000384676 136 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 RNA5SP219-201ENST00000390940 113 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 RNU6-1025P-201ENST00000410629 104 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 RNU6-607P-201ENST00000411283 108 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 PDCL2P1-201ENST00000419302 352 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 MTND3P25-201ENST00000509243 135 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 RNU4-49P-201ENST00000516080 140 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 SNORA14.1-201ENST00000516113 141 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 AC009902.1-201ENST00000519351 183 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 CYCSP27-201ENST00000527643 293 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.87□□□□□ -1.95
PDS5AQ29RF7 HMGB1P14-201ENST00000557424 591 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 AMZ2P1-203ENST00000565833 850 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 FGF7P1-201ENST00000582820 288 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 MIR3670-2-201ENST00000582974 65 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 MIR3670-1-201ENST00000584160 65 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 MIR3670-3-201ENST00000584855 65 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 AP000787.2-201ENST00000604432 568 ntBASIC2.87□□□□□ -1.95
PDS5AQ29RF7 CTHRC1P1-201ENST00000605383 469 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms