Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 MIR29C-201ENST00000385231 88 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 RNU6-932P-201ENST00000391108 106 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 SNORA12-201ENST00000391162 147 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 MIR1302-8-201ENST00000408342 128 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 MTND1P21-201ENST00000412991 285 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 MTND2P20-201ENST00000440805 661 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL158053.1-201ENST00000441503 453 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 ARPC3P5-201ENST00000448802 534 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC108729.2-201ENST00000476543 840 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 RPF2P2-201ENST00000504693 896 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 RNU6-567P-201ENST00000516746 107 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 RNU6-528P-201ENST00000516926 100 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 ACA59.2-201ENST00000517061 156 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC004812.1-201ENST00000540773 146 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC006199.1-201ENST00000548728 219 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL359212.1-201ENST00000556608 614 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC019288.1-201ENST00000557918 224 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 ROCK1P1-201ENST00000573767 549 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC012065.4-201ENST00000602445 679 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL445435.1-201ENST00000604232 665 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC013244.3-201ENST00000605614 388 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL158163.2-201ENST00000619110 700 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CACNA1EQ15878 SNORA75B-201ENST00000384053 137 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 RNU6-701P-201ENST00000384059 107 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 RNU6-1300P-201ENST00000391046 108 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL359634.1-202ENST00000404721 284 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL359704.1-201ENST00000411586 781 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 NDUFB4P7-201ENST00000423198 363 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 RAC1P6-201ENST00000423911 575 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 RPL17P35-201ENST00000432217 549 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC245047.4-201ENST00000433189 144 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 MTCO3P43-201ENST00000440974 771 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC114878.1-201ENST00000441166 358 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 MRPS17P3-201ENST00000465453 385 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC109927.2-201ENST00000506416 303 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 MIR4782-201ENST00000577987 79 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL391813.1-201ENST00000603098 260 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AL133445.2-201ENST00000611191 527 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC084824.5-201ENST00000612009 413 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 Z99571.1-201ENST00000636677 394 ntBASIC0.46□□□□□ -2.34
CACNA1EQ15878 AC107982.1-201ENST00000507171 1300 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 AC092447.10-201ENST00000620607 1652 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 Y_RNA.311-201ENST00000365068 96 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 Y_RNA.571-201ENST00000384753 98 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 MIR217-201ENST00000384817 110 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 MIR320C1-201ENST00000408566 88 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 RPL37P10-201ENST00000412884 288 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.45□□□□□ -2.34
CACNA1EQ15878 TIMM9P2-201ENST00000419324 266 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 PPP1R11P2-201ENST00000423543 382 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 BRK1P2-201ENST00000442875 223 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 PRPS1P1-201ENST00000445305 876 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
CACNA1EQ15878 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CACNA1EQ15878 AP1S2P1-201ENST00000457344 379 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
CACNA1EQ15878 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC0.45□□□□□ -2.34
CACNA1EQ15878 AC079395.1-201ENST00000510981 262 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.45□□□□□ -2.34
CACNA1EQ15878 SNORA25.11-201ENST00000515935 105 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.45□□□□□ -2.34
CACNA1EQ15878 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.45□□□□□ -2.34
CACNA1EQ15878 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.45□□□□□ -2.34
CACNA1EQ15878 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC0.45□□□□□ -2.34
CACNA1EQ15878 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.45□□□□□ -2.34
CACNA1EQ15878 AL078604.3-201ENST00000615580 211 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 AC092192.1-201ENST00000633154 1018 ntBASIC0.45□□□□□ -2.34
CACNA1EQ15878 RNU6-1187P-201ENST00000364771 110 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 MTATP6P27-201ENST00000416987 621 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 RPS27P16-201ENST00000425758 201 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 MTCYBP32-201ENST00000427945 1084 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 RPL7P43-201ENST00000478876 753 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC010409.1-201ENST00000487382 476 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC099513.1-201ENST00000490423 301 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC134050.1-201ENST00000495088 933 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC009646.1-201ENST00000510455 318 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 NRON-201ENST00000517270 370 ntBASIC0.44□□□□□ -2.34
CACNA1EQ15878 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.44□□□□□ -2.34
CACNA1EQ15878 AP003049.1-201ENST00000529418 457 ntBASIC0.44□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms