| PAX8 | Q06710 | AC215522.3-201 | ENST00000635602 | 354 nt | TSL 5 BASIC | 2.32 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | ECT2-211 | ENST00000441497 | 2825 nt | APPRIS P2 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | CHD9-218 | ENST00000566029 | 13110 nt | APPRIS P1 TSL 1 (best) BASIC | 2.32 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | CASC1-205 | ENST00000545133 | 2146 nt | APPRIS ALT2 TSL 2 BASIC | 2.32 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC108206.1-201 | ENST00000570186 | 4159 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | ATF2-204 | ENST00000409437 | 3697 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | ANKAR-209 | ENST00000520309 | 4410 nt | APPRIS P1 TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AP003122.5-201 | ENST00000527668 | 3766 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | ARHGAP28-204 | ENST00000419673 | 5492 nt | APPRIS P2 TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU1-35P-201 | ENST00000362782 | 153 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-797P-201 | ENST00000363101 | 109 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-658P-201 | ENST00000384606 | 106 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR10A-201 | ENST00000385043 | 110 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RAP1BP3-201 | ENST00000407180 | 549 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC003092.1-201 | ENST00000415536 | 639 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC01402-201 | ENST00000422226 | 279 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | HMGN2P30-201 | ENST00000423237 | 256 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC063976.3-201 | ENST00000426849 | 329 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RPS29P6-201 | ENST00000438196 | 145 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MTND4LP16-201 | ENST00000440828 | 295 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RPL32P28-201 | ENST00000443577 | 397 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC013727.2-201 | ENST00000447761 | 545 nt | TSL 4 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC092001.1-201 | ENST00000453012 | 261 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MTATP6P7-201 | ENST00000453315 | 681 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL136164.1-201 | ENST00000456795 | 352 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC104304.1-201 | ENST00000505797 | 291 nt | APPRIS P1 TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC105389.2-201 | ENST00000506475 | 435 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | FGF7P4-201 | ENST00000509595 | 295 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MTND3P22-201 | ENST00000510932 | 243 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC02103-201 | ENST00000512849 | 523 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LIAS-206 | ENST00000513731 | 826 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Y_RNA.682-201 | ENST00000516457 | 100 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Y_RNA.691-201 | ENST00000516611 | 103 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-1332P-201 | ENST00000516666 | 104 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AP005597.4-201 | ENST00000526762 | 229 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC02442-201 | ENST00000537732 | 343 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC025423.5-201 | ENST00000550230 | 219 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC074052.2-201 | ENST00000562516 | 214 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR4319-201 | ENST00000577285 | 85 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC023043.2-201 | ENST00000589678 | 1026 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC243960.4-201 | ENST00000600532 | 288 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | ZNF667-AS1-209 | ENST00000601875 | 495 nt | TSL 3 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-85P-201 | ENST00000605989 | 107 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC022017.1-201 | ENST00000608793 | 559 nt | TSL 4 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | uc_338.15-201 | ENST00000615470 | 191 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC009233.1-201 | ENST00000616477 | 371 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | HOTAIRM1_5.1-201 | ENST00000619311 | 145 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RMST_7.1-201 | ENST00000621935 | 268 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC073308.1-201 | ENST00000623696 | 305 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | LINC01002-215 | ENST00000632203 | 314 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR6733-201 | ENST00000635723 | 61 nt | BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | SLC6A15-202 | ENST00000309283 | 3108 nt | TSL 5 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MGAT4C-210 | ENST00000620241 | 3194 nt | APPRIS P1 TSL 2 BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AKAP9-202 | ENST00000358100 | 10309 nt | TSL 1 (best) BASIC | 2.31 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | HMGN5-201 | ENST00000358130 | 2126 nt | APPRIS P2 TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | FTX-214 | ENST00000638437 | 12267 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | IL33-203 | ENST00000456383 | 2501 nt | TSL 5 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | ANP32E-209 | ENST00000616917 | 2989 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC062016.1-201 | ENST00000355719 | 319 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU4-73P-201 | ENST00000363164 | 141 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Y_RNA.135-201 | ENST00000363439 | 95 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | Y_RNA.212-201 | ENST00000364177 | 102 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-1013P-201 | ENST00000384180 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR512-1-201 | ENST00000384913 | 84 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR518D-201 | ENST00000385014 | 87 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR9-1-201 | ENST00000385198 | 89 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | SNORD73A-201 | ENST00000386062 | 65 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | TRAJ59-201 | ENST00000390480 | 54 nt | APPRIS P1 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL360182.1-201 | ENST00000397433 | 468 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL590004.2-201 | ENST00000404787 | 371 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL031121.1-201 | ENST00000406553 | 254 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | SNORA11.2-201 | ENST00000408318 | 127 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RPL26P27-201 | ENST00000414397 | 437 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC007314.1-201 | ENST00000414538 | 565 nt | TSL 4 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC010967.2-201 | ENST00000418451 | 333 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL136322.1-201 | ENST00000422250 | 548 nt | TSL 4 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | NUP35P1-201 | ENST00000422734 | 947 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RPL7P37-201 | ENST00000425095 | 738 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MTND3P23-201 | ENST00000431980 | 347 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL157937.1-201 | ENST00000435092 | 443 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC098831.1-201 | ENST00000440661 | 216 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC069540.2-201 | ENST00000441776 | 351 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | snoU109.2-201 | ENST00000459316 | 135 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU7-138P-201 | ENST00000459479 | 64 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RN7SL499P-201 | ENST00000481141 | 276 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-277P-201 | ENST00000516272 | 106 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | RNU6-566P-201 | ENST00000516790 | 107 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | PKIA-203 | ENST00000518467 | 588 nt | APPRIS P1 TSL 1 (best) BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC124290.1-202 | ENST00000523342 | 387 nt | TSL 3 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | COPS8P3-201 | ENST00000526024 | 482 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AP001783.1-202 | ENST00000534620 | 408 nt | TSL 2 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | HPRT1P3-201 | ENST00000539521 | 576 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC079600.2-201 | ENST00000550076 | 130 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC009754.1-201 | ENST00000566282 | 540 nt | TSL 4 BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AC005668.1-201 | ENST00000571142 | 476 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | hsa-mir-3119-1.1-201 | ENST00000577602 | 85 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | MIR4782-201 | ENST00000577987 | 79 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL645944.1-201 | ENST00000603857 | 493 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL355598.1-201 | ENST00000604169 | 202 nt | BASIC | 2.3 | □□□□□ -2.04 | | |
| PAX8 | Q06710 | AL022345.1-201 | ENST00000607292 | 135 nt | BASIC | 2.3 | □□□□□ -2.04 | | |