Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR559-201ENST00000385188 96 ntBASIC3.25□□□□□ -1.89
COPB1P53618 SNORA75.4-201ENST00000391278 119 ntBASIC3.25□□□□□ -1.89
COPB1P53618 AL096701.2-201ENST00000416920 238 ntBASIC3.25□□□□□ -1.89
COPB1P53618 AL627311.1-201ENST00000431514 115 ntBASIC3.25□□□□□ -1.89
COPB1P53618 SNORD5.1-201ENST00000458800 75 ntBASIC3.25□□□□□ -1.89
COPB1P53618 RNU7-187P-201ENST00000458985 68 ntBASIC3.25□□□□□ -1.89
COPB1P53618 AC117440.1-201ENST00000474107 571 ntBASIC3.25□□□□□ -1.89
COPB1P53618 SNORA31.19-201ENST00000517079 126 ntBASIC3.25□□□□□ -1.89
COPB1P53618 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.25□□□□□ -1.89
COPB1P53618 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.25□□□□□ -1.89
COPB1P53618 MIR5680-201ENST00000577577 84 ntBASIC3.25□□□□□ -1.89
COPB1P53618 OR1M4P-201ENST00000589199 287 ntBASIC3.25□□□□□ -1.89
COPB1P53618 CYP2C61P-201ENST00000604072 290 ntBASIC3.25□□□□□ -1.89
COPB1P53618 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.25□□□□□ -1.89
COPB1P53618 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.25□□□□□ -1.89
COPB1P53618 MIR7112-201ENST00000616126 65 ntBASIC3.25□□□□□ -1.89
COPB1P53618 AC244517.12-201ENST00000623581 663 ntBASIC3.25□□□□□ -1.89
COPB1P53618 AC138627.2-201ENST00000624202 601 ntBASIC3.25□□□□□ -1.89
COPB1P53618 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.25□□□□□ -1.89
COPB1P53618 GABRG2-229ENST00000641017 3628 ntBASIC3.25□□□□□ -1.89
COPB1P53618 AC090740.1-201ENST00000623193 2262 ntBASIC3.24□□□□□ -1.89
COPB1P53618 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COPB1P53618 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
COPB1P53618 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.24□□□□□ -1.89
COPB1P53618 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COPB1P53618 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
COPB1P53618 AC009487.2-201ENST00000420969 6821 ntBASIC3.24□□□□□ -1.89
COPB1P53618 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.24□□□□□ -1.89
COPB1P53618 Y_RNA.404-201ENST00000383978 102 ntBASIC3.24□□□□□ -1.89
COPB1P53618 RNU6-692P-201ENST00000384496 107 ntBASIC3.24□□□□□ -1.89
COPB1P53618 RNU6-140P-201ENST00000384566 108 ntBASIC3.24□□□□□ -1.89
COPB1P53618 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
COPB1P53618 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.24□□□□□ -1.89
COPB1P53618 RNU6-1050P-201ENST00000410388 107 ntBASIC3.24□□□□□ -1.89
COPB1P53618 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.24□□□□□ -1.89
COPB1P53618 AL512844.2-201ENST00000433990 593 ntBASIC3.24□□□□□ -1.89
COPB1P53618 AC092573.2-201ENST00000434546 243 ntBASIC3.24□□□□□ -1.89
COPB1P53618 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.24□□□□□ -1.89
COPB1P53618 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.24□□□□□ -1.89
COPB1P53618 RPL30P15-201ENST00000457129 321 ntBASIC3.24□□□□□ -1.89
COPB1P53618 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.24□□□□□ -1.89
COPB1P53618 Y_RNA.631-201ENST00000459607 101 ntBASIC3.24□□□□□ -1.89
COPB1P53618 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.24□□□□□ -1.89
COPB1P53618 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.24□□□□□ -1.89
COPB1P53618 AC006483.1-201ENST00000487308 313 ntBASIC3.24□□□□□ -1.89
COPB1P53618 AC097473.1-201ENST00000508142 408 ntBASIC3.24□□□□□ -1.89
COPB1P53618 Y_RNA.670-201ENST00000516255 105 ntBASIC3.24□□□□□ -1.89
COPB1P53618 RNU6-703P-201ENST00000516946 107 ntBASIC3.24□□□□□ -1.89
COPB1P53618 Y_RNA.711-201ENST00000516993 102 ntBASIC3.24□□□□□ -1.89
COPB1P53618 RNU1-54P-201ENST00000517181 120 ntBASIC3.24□□□□□ -1.89
COPB1P53618 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
COPB1P53618 AC104576.1-201ENST00000524225 88 ntBASIC3.24□□□□□ -1.89
COPB1P53618 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.24□□□□□ -1.89
COPB1P53618 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.24□□□□□ -1.89
COPB1P53618 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.24□□□□□ -1.89
COPB1P53618 MIR4513-201ENST00000581077 86 ntBASIC3.24□□□□□ -1.89
COPB1P53618 MIR4325-201ENST00000583049 90 ntBASIC3.24□□□□□ -1.89
COPB1P53618 YPEL5P2-201ENST00000605553 359 ntBASIC3.24□□□□□ -1.89
COPB1P53618 AC009229.3-201ENST00000608056 282 ntBASIC3.24□□□□□ -1.89
COPB1P53618 FTX_3.1-201ENST00000610451 147 ntBASIC3.24□□□□□ -1.89
COPB1P53618 AL162274.2-201ENST00000614406 332 ntBASIC3.24□□□□□ -1.89
COPB1P53618 uc_338.22-201ENST00000622722 187 ntBASIC3.24□□□□□ -1.89
COPB1P53618 Z69720.2-201ENST00000624755 279 ntBASIC3.24□□□□□ -1.89
COPB1P53618 U2.21-201ENST00000637295 81 ntBASIC3.24□□□□□ -1.89
COPB1P53618 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.24□□□□□ -1.89
COPB1P53618 AC108206.1-201ENST00000570186 4159 ntBASIC3.23□□□□□ -1.89
COPB1P53618 RNU1-35P-201ENST00000362782 153 ntBASIC3.23□□□□□ -1.89
COPB1P53618 Y_RNA.162-201ENST00000363683 102 ntBASIC3.23□□□□□ -1.89
COPB1P53618 Y_RNA.216-201ENST00000364205 93 ntBASIC3.23□□□□□ -1.89
COPB1P53618 Y_RNA.473-201ENST00000384333 102 ntBASIC3.23□□□□□ -1.89
COPB1P53618 RNU6-306P-201ENST00000384617 107 ntBASIC3.23□□□□□ -1.89
COPB1P53618 Y_RNA.594-201ENST00000410373 140 ntBASIC3.23□□□□□ -1.89
COPB1P53618 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.23□□□□□ -1.89
COPB1P53618 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.23□□□□□ -1.89
COPB1P53618 RPL37P4-201ENST00000448908 268 ntBASIC3.23□□□□□ -1.89
COPB1P53618 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.23□□□□□ -1.89
COPB1P53618 RPL21P104-201ENST00000464143 478 ntBASIC3.23□□□□□ -1.89
COPB1P53618 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.23□□□□□ -1.89
COPB1P53618 MTND4LP22-201ENST00000508209 276 ntBASIC3.23□□□□□ -1.89
COPB1P53618 Y_RNA.708-201ENST00000516950 96 ntBASIC3.23□□□□□ -1.89
COPB1P53618 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.23□□□□□ -1.89
COPB1P53618 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.23□□□□□ -1.89
COPB1P53618 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.23□□□□□ -1.89
COPB1P53618 PART1_1.1-201ENST00000611761 217 ntBASIC3.23□□□□□ -1.89
COPB1P53618 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.23□□□□□ -1.89
COPB1P53618 MTND5P10-201ENST00000603719 1809 ntBASIC3.23□□□□□ -1.89
COPB1P53618 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.23□□□□□ -1.89
COPB1P53618 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
COPB1P53618 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
COPB1P53618 Y_RNA.151-201ENST00000363566 112 ntBASIC3.22□□□□□ -1.89
COPB1P53618 SNORD56-201ENST00000413522 71 ntBASIC3.22□□□□□ -1.89
COPB1P53618 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.22□□□□□ -1.89
COPB1P53618 PGBD4P6-201ENST00000421501 610 ntBASIC3.22□□□□□ -1.89
COPB1P53618 AC098614.2-201ENST00000426040 255 ntBASIC3.22□□□□□ -1.89
COPB1P53618 USP9YP30-201ENST00000430729 455 ntBASIC3.22□□□□□ -1.89
COPB1P53618 AL137792.2-201ENST00000443484 235 ntBASIC3.22□□□□□ -1.89
COPB1P53618 RPL12P25-201ENST00000455592 494 ntBASIC3.22□□□□□ -1.89
COPB1P53618 AC092798.1-201ENST00000458542 409 ntBASIC3.22□□□□□ -1.89
COPB1P53618 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.22□□□□□ -1.89
COPB1P53618 RNU6-572P-201ENST00000516724 80 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms