Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SLC6A4P31645 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A4P31645 AC058791.1-201ENST00000608412 3198 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A4P31645 SNORA38.1-201ENST00000364172 131 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 RNU6-1317P-201ENST00000364582 104 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 U8.8-201ENST00000365399 135 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 AL357075.1-201ENST00000404107 726 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 EIF4EP2-201ENST00000422816 654 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 SNRPEP4-201ENST00000435815 279 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SLC6A4P31645 RPL23AP14-201ENST00000468281 468 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 MIR2276-201ENST00000516886 89 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 SNORD116.3-201ENST00000517176 78 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.42□□□□□ -1.86
SLC6A4P31645 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC6A4P31645 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.42□□□□□ -1.86
SLC6A4P31645 HIGD1AP1-201ENST00000550979 275 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 H3F3AP1-201ENST00000559984 334 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 SUB1P3-201ENST00000564581 315 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 MIR3609-201ENST00000582661 80 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 BNIP3P16-201ENST00000589779 534 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 MIR8076-201ENST00000611401 83 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 MIR6076-201ENST00000617521 113 ntBASIC3.42□□□□□ -1.86
SLC6A4P31645 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SLC6A4P31645 AP001148.1-201ENST00000624124 2359 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC6A4P31645 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC6A4P31645 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SLC6A4P31645 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC6A4P31645 Y_RNA.80-201ENST00000362996 102 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 Y_RNA.148-201ENST00000363557 117 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 Y_RNA.158-201ENST00000363651 101 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 MIR184-201ENST00000384962 84 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 RPS29P13-201ENST00000402041 169 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 AL356968.1-201ENST00000416622 474 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC6A4P31645 AC008267.5-201ENST00000424928 265 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC6A4P31645 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC6A4P31645 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.41□□□□□ -1.86
SLC6A4P31645 Y_RNA.661-201ENST00000516003 99 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 RNU6-699P-201ENST00000517081 110 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 AC107934.2-201ENST00000518653 310 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 AP005902.1-201ENST00000521358 186 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.41□□□□□ -1.86
SLC6A4P31645 MIR4425-201ENST00000580572 84 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.41□□□□□ -1.86
SLC6A4P31645 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.41□□□□□ -1.86
SLC6A4P31645 AC008962.1-201ENST00000605729 304 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 AC002076.2-201ENST00000617362 122 ntBASIC3.41□□□□□ -1.86
SLC6A4P31645 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SLC6A4P31645 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
SLC6A4P31645 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
SLC6A4P31645 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.4□□□□□ -1.86
SLC6A4P31645 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.4□□□□□ -1.86
SLC6A4P31645 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.4□□□□□ -1.87
SLC6A4P31645 MIR30E-201ENST00000362104 92 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 RNA5SP295-201ENST00000362655 121 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 RNU6-78P-201ENST00000362897 107 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 RNU6-884P-201ENST00000363889 107 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 Y_RNA.364-201ENST00000365532 101 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC6A4P31645 AC243428.1-201ENST00000421099 264 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 RPL23AP82-202ENST00000427528 469 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 AL590664.1-201ENST00000448065 339 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SLC6A4P31645 RNU7-170P-201ENST00000459303 61 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 CENPBD1P1-201ENST00000464061 469 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 RPL23AP67-201ENST00000465341 474 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 RPL17P19-201ENST00000489069 552 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 AC116655.1-201ENST00000508324 901 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC6A4P31645 GNAI2P1-201ENST00000541815 315 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 AC103996.1-201ENST00000555468 102 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
SLC6A4P31645 AC024153.1-201ENST00000603103 365 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 AC136443.5-201ENST00000603741 370 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 YPEL5P2-201ENST00000605553 359 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.4□□□□□ -1.87
SLC6A4P31645 AC005046.1-201ENST00000608515 625 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.4□□□□□ -1.87
SLC6A4P31645 AC091925.1-201ENST00000623204 462 ntBASIC3.4□□□□□ -1.87
SLC6A4P31645 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SLC6A4P31645 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC6A4P31645 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC6A4P31645 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SLC6A4P31645 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.39□□□□□ -1.87
SLC6A4P31645 MIR521-1-201ENST00000384902 87 ntBASIC3.39□□□□□ -1.87
SLC6A4P31645 MRPL42P3-201ENST00000401492 326 ntBASIC3.39□□□□□ -1.87
SLC6A4P31645 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.39□□□□□ -1.87
SLC6A4P31645 BX276092.3-201ENST00000424182 230 ntBASIC3.39□□□□□ -1.87
SLC6A4P31645 RPL26P9-201ENST00000457466 433 ntBASIC3.39□□□□□ -1.87
SLC6A4P31645 AC015911.1-201ENST00000495111 156 ntBASIC3.39□□□□□ -1.87
SLC6A4P31645 RPL7P47-201ENST00000497299 556 ntBASIC3.39□□□□□ -1.87
SLC6A4P31645 AC006445.2-201ENST00000510061 472 ntBASIC3.39□□□□□ -1.87
SLC6A4P31645 PHBP14-201ENST00000512887 367 ntBASIC3.39□□□□□ -1.87
SLC6A4P31645 RNU6-612P-201ENST00000516909 102 ntBASIC3.39□□□□□ -1.87
SLC6A4P31645 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms