Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 MTCYBP1-201ENST00000454315 1119 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.44□□□□□ -2.18
HLA-DMAP28067 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.44□□□□□ -2.18
HLA-DMAP28067 Y_RNA.672-201ENST00000516289 104 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 SCARNA24.1-201ENST00000516465 137 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 RN7SKP287-201ENST00000516546 266 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 ADI1P3-201ENST00000549509 470 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.44□□□□□ -2.18
HLA-DMAP28067 AC093424.1-201ENST00000604999 338 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 AL451064.1-201ENST00000607718 471 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 AC096772.1-201ENST00000609146 564 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 AL359547.2-201ENST00000615810 418 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 AC009159.2-201ENST00000617603 606 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 AC092656.1-203ENST00000624134 423 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 AL157786.1-207ENST00000627771 695 ntBASIC1.44□□□□□ -2.18
HLA-DMAP28067 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
HLA-DMAP28067 MTND5P10-201ENST00000603719 1809 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 ZNF355P-201ENST00000427301 3216 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 Y_RNA.40-201ENST00000362645 93 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 SNORD14B-201ENST00000364533 90 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 RNU6-1179P-201ENST00000384667 107 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 MIR30A-201ENST00000385092 71 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
HLA-DMAP28067 RPL23AP32-201ENST00000395315 459 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DMAP28067 EEF1A1P40-201ENST00000412883 573 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 AC074117.2-201ENST00000417130 397 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 Z98742.3-201ENST00000418637 326 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DMAP28067 AC112492.4-201ENST00000456549 352 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 RNA5SP57-201ENST00000459463 123 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 MED28P2-201ENST00000475771 317 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 ANXA2P1-201ENST00000505539 926 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.43□□□□□ -2.18
HLA-DMAP28067 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DMAP28067 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.43□□□□□ -2.18
HLA-DMAP28067 FABP5P5-201ENST00000515537 406 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 Y_RNA.687-201ENST00000516558 91 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 RNU6-667P-201ENST00000517186 102 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DMAP28067 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.43□□□□□ -2.18
HLA-DMAP28067 BNIP3P6-201ENST00000549284 499 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.43□□□□□ -2.18
HLA-DMAP28067 AC136619.2-201ENST00000563361 631 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 MTATP6P24-201ENST00000576835 677 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 MIR4760-201ENST00000585040 80 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HLA-DMAP28067 RPL30P11-203ENST00000598995 310 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 CLIC4P2-201ENST00000601934 717 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 AL359999.1-201ENST00000604513 294 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 AC093788.1-201ENST00000609356 927 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 uc_338.5-201ENST00000611839 155 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 MIR6852-201ENST00000621699 66 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 AL359740.1-201ENST00000624340 592 ntBASIC1.43□□□□□ -2.18
HLA-DMAP28067 MIR449A-201ENST00000362113 91 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 RNU6-553P-201ENST00000364047 96 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 RNU6-641P-201ENST00000384006 107 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 MIR9-3-201ENST00000385084 90 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 RPS3AP36-201ENST00000398190 775 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AL031577.2-201ENST00000404133 280 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 MIR1294-201ENST00000408503 142 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 RNA5SP425-201ENST00000410336 112 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 RPL21P90-201ENST00000415692 466 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 DPH3P2-201ENST00000422618 250 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMAP28067 AL627311.1-201ENST00000431514 115 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DMAP28067 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMAP28067 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMAP28067 MTND2P4-201ENST00000445034 1004 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 MTCO2P29-201ENST00000465212 189 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMAP28067 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC1.42□□□□□ -2.18
HLA-DMAP28067 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.42□□□□□ -2.18
HLA-DMAP28067 RNU6-232P-201ENST00000517144 64 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 RNU6-586P-201ENST00000517265 104 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AP004607.1-201ENST00000524456 203 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AL512310.1-201ENST00000548639 172 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 CR383656.8-201ENST00000549046 145 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AC002400.1-201ENST00000569310 726 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 BNIP3P30-201ENST00000601184 574 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AL670379.4-201ENST00000605279 254 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DMAP28067 AC093648.1-201ENST00000623546 606 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AL603839.4-201ENST00000624658 1005 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AC007494.3-201ENST00000624660 743 ntBASIC1.42□□□□□ -2.18
HLA-DMAP28067 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.42□□□□□ -2.18
HLA-DMAP28067 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.41□□□□□ -2.18
HLA-DMAP28067 MIR412-201ENST00000362142 91 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 SNORD114-19-201ENST00000363072 75 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 RNY4P34-201ENST00000364779 95 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 RNU6-622P-201ENST00000384272 103 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 RNU6-843P-201ENST00000384454 104 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 SNORD116-20-201ENST00000384529 92 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 MIR23A-201ENST00000385245 73 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 Y_RNA.598-201ENST00000410480 95 ntBASIC1.41□□□□□ -2.18
HLA-DMAP28067 RNU2-48P-201ENST00000410694 191 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms