Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RPL30P7-201ENST00000479312 323 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.53□□□□□ -2.33
ABCA1O95477 AC136932.1-201ENST00000574771 208 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 AC005261.5-201ENST00000596280 355 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 AC107952.2-201ENST00000606048 486 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 AL355802.4-201ENST00000607635 548 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 AP001033.2-201ENST00000609701 1003 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 AL132822.1-201ENST00000617063 513 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.53□□□□□ -2.33
ABCA1O95477 VTRNA1-3-201ENST00000365645 89 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 SKA2P1-201ENST00000425592 390 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
ABCA1O95477 MTND5P15-201ENST00000434246 349 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 AC007000.2-201ENST00000442564 487 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 MTCO3P45-201ENST00000443036 613 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 AL035666.1-201ENST00000446195 348 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.52□□□□□ -2.33
ABCA1O95477 MTND1P9-201ENST00000453775 944 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
ABCA1O95477 KATNBL1P5-201ENST00000605015 517 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
ABCA1O95477 AC009269.6-201ENST00000621778 588 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
ABCA1O95477 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.52□□□□□ -2.33
ABCA1O95477 RPS15AP9-201ENST00000439856 381 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 AP001324.2-201ENST00000461163 319 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.52□□□□□ -2.33
ABCA1O95477 RNU6-965P-201ENST00000516721 96 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.52□□□□□ -2.33
ABCA1O95477 BNIP3P27-201ENST00000599991 412 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 CLIC4P2-201ENST00000601934 717 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 AC007792.1-201ENST00000623023 402 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 AC027335.2-201ENST00000624030 375 ntBASIC0.52□□□□□ -2.33
ABCA1O95477 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.51□□□□□ -2.33
ABCA1O95477 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
ABCA1O95477 RNU6-858P-201ENST00000362436 107 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 RNU6-1167P-201ENST00000363227 94 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 RNU6-898P-201ENST00000365627 104 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 RNU6-16P-201ENST00000384385 107 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
ABCA1O95477 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
ABCA1O95477 RAC1P8-201ENST00000427086 527 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.51□□□□□ -2.33
ABCA1O95477 MTATP6P30-201ENST00000443540 664 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.51□□□□□ -2.33
ABCA1O95477 RPS26P55-201ENST00000471178 356 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 AC008628.1-201ENST00000508663 265 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 SNORA31.17-201ENST00000516953 127 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 RAB11AP2-201ENST00000545905 639 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 OR6C7P-201ENST00000547875 934 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 AL353997.4-201ENST00000586196 166 ntBASIC0.51□□□□□ -2.33
ABCA1O95477 HSBP1P2-201ENST00000299671 229 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 Y_RNA.167-201ENST00000363735 109 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 RNA5SP493-201ENST00000364115 91 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 RNU1-36P-201ENST00000365130 165 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 RNU6-546P-201ENST00000383991 107 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 RNA5SP57-201ENST00000459463 123 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AC008379.1-201ENST00000463655 464 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.5□□□□□ -2.33
ABCA1O95477 RNU6-586P-201ENST00000517265 104 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AP003122.4-201ENST00000530980 758 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.5□□□□□ -2.33
ABCA1O95477 MIR4789-201ENST00000577469 82 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AC146944.4-201ENST00000602697 718 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 MIR6134-201ENST00000617606 109 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AL136313.1-201ENST00000624804 202 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AC087821.2-201ENST00000637086 450 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
ABCA1O95477 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
ABCA1O95477 OR4G2P-201ENST00000328113 903 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 RNU6-1280P-201ENST00000365211 107 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 RNU6-26P-201ENST00000383985 107 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AC092634.2-201ENST00000428146 1010 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 DYNLT3P2-201ENST00000442517 295 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 RNU6-678P-201ENST00000516832 109 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AP003484.1-201ENST00000530974 250 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 LINC00557-201ENST00000563184 1279 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.5□□□□□ -2.33
ABCA1O95477 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC0.5□□□□□ -2.33
ABCA1O95477 AC090330.1-201ENST00000588646 764 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AC069545.1-201ENST00000605671 358 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AC067863.3-201ENST00000624172 122 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 AC019226.1-201ENST00000625666 515 ntBASIC0.5□□□□□ -2.33
ABCA1O95477 MIR217-201ENST00000384817 110 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 MIR618-201ENST00000385287 98 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA1O95477 MTCO2P5-201ENST00000422621 426 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA1O95477 PTGES3P1-201ENST00000439531 483 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 CR769776.1-201ENST00000441254 787 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.49□□□□□ -2.33
ABCA1O95477 AC018868.1-201ENST00000491307 315 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA1O95477 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.49□□□□□ -2.33
ABCA1O95477 AP003034.1-201ENST00000534621 422 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 AC023050.2-201ENST00000544968 387 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 VN1R82P-201ENST00000601481 356 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms