Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.86□□□□□ -1.95
LDB3O75112 AC092436.3-201ENST00000511788 257 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RNA5SP384-201ENST00000516615 116 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RNU6-1016P-201ENST00000516689 94 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RNU6-928P-201ENST00000516876 104 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RNA5SP165-201ENST00000517142 115 ntBASIC2.86□□□□□ -1.95
LDB3O75112 Y_RNA.720-201ENST00000517166 92 ntBASIC2.86□□□□□ -1.95
LDB3O75112 AC009812.2-201ENST00000517657 457 ntBASIC2.86□□□□□ -1.95
LDB3O75112 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
LDB3O75112 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.86□□□□□ -1.95
LDB3O75112 COX6CP5-201ENST00000527162 228 ntBASIC2.86□□□□□ -1.95
LDB3O75112 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB3O75112 AC025423.5-201ENST00000550230 219 ntBASIC2.86□□□□□ -1.95
LDB3O75112 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.86□□□□□ -1.95
LDB3O75112 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB3O75112 MIR5690-201ENST00000583739 73 ntBASIC2.86□□□□□ -1.95
LDB3O75112 AC004805.2-201ENST00000605382 482 ntBASIC2.86□□□□□ -1.95
LDB3O75112 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LDB3O75112 AC005014.2-201ENST00000607795 599 ntBASIC2.86□□□□□ -1.95
LDB3O75112 AC022418.1-201ENST00000624118 445 ntBASIC2.86□□□□□ -1.95
LDB3O75112 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.86□□□□□ -1.95
LDB3O75112 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LDB3O75112 AC110774.1-201ENST00000623567 2018 ntBASIC2.86□□□□□ -1.95
LDB3O75112 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
LDB3O75112 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LDB3O75112 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB3O75112 MIR422A-201ENST00000362286 90 ntBASIC2.85□□□□□ -1.95
LDB3O75112 SNORA71.1-201ENST00000364523 117 ntBASIC2.85□□□□□ -1.95
LDB3O75112 Y_RNA.463-201ENST00000384271 102 ntBASIC2.85□□□□□ -1.95
LDB3O75112 RNU6-331P-201ENST00000384724 107 ntBASIC2.85□□□□□ -1.95
LDB3O75112 MIR491-201ENST00000384877 84 ntBASIC2.85□□□□□ -1.95
LDB3O75112 RNU6-1025P-201ENST00000410629 104 ntBASIC2.85□□□□□ -1.95
LDB3O75112 RPL7P10-201ENST00000417407 739 ntBASIC2.85□□□□□ -1.95
LDB3O75112 MCFD2P1-201ENST00000417812 300 ntBASIC2.85□□□□□ -1.95
LDB3O75112 USP9YP30-201ENST00000430729 455 ntBASIC2.85□□□□□ -1.95
LDB3O75112 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.85□□□□□ -1.95
LDB3O75112 AL035666.1-201ENST00000446195 348 ntBASIC2.85□□□□□ -1.95
LDB3O75112 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.85□□□□□ -1.95
LDB3O75112 MTND5P22-201ENST00000458380 195 ntBASIC2.85□□□□□ -1.95
LDB3O75112 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.85□□□□□ -1.95
LDB3O75112 AC097473.1-201ENST00000508142 408 ntBASIC2.85□□□□□ -1.95
LDB3O75112 MTND3P25-201ENST00000509243 135 ntBASIC2.85□□□□□ -1.95
LDB3O75112 AC116337.1-201ENST00000509680 687 ntBASIC2.85□□□□□ -1.95
LDB3O75112 AC093331.1-201ENST00000521474 169 ntBASIC2.85□□□□□ -1.95
LDB3O75112 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.85□□□□□ -1.95
LDB3O75112 AC018462.2-201ENST00000605375 395 ntBASIC2.85□□□□□ -1.95
LDB3O75112 FTX_3.1-201ENST00000610451 147 ntBASIC2.85□□□□□ -1.95
LDB3O75112 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.85□□□□□ -1.95
LDB3O75112 AC010378.1-201ENST00000619270 362 ntBASIC2.85□□□□□ -1.95
LDB3O75112 AC138627.2-201ENST00000624202 601 ntBASIC2.85□□□□□ -1.95
LDB3O75112 AC103988.1-201ENST00000566382 2177 ntBASIC2.85□□□□□ -1.95
LDB3O75112 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LDB3O75112 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
LDB3O75112 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
LDB3O75112 AC010680.1-201ENST00000590024 3590 ntBASIC2.85□□□□□ -1.95
LDB3O75112 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
LDB3O75112 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LDB3O75112 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.84□□□□□ -1.95
LDB3O75112 MAPK10-362ENST00000641864 4484 ntBASIC2.84□□□□□ -1.95
LDB3O75112 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
LDB3O75112 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
LDB3O75112 AC073325.2-201ENST00000339545 159 ntBASIC2.84□□□□□ -1.95
LDB3O75112 RNU6-266P-201ENST00000364225 107 ntBASIC2.84□□□□□ -1.95
LDB3O75112 SNORA75B-201ENST00000384053 137 ntBASIC2.84□□□□□ -1.95
LDB3O75112 RNU6-463P-201ENST00000384340 107 ntBASIC2.84□□□□□ -1.95
LDB3O75112 SNORA46-201ENST00000384762 135 ntBASIC2.84□□□□□ -1.95
LDB3O75112 SNORD73A-201ENST00000386062 65 ntBASIC2.84□□□□□ -1.95
LDB3O75112 RNU6-1106P-201ENST00000390845 107 ntBASIC2.84□□□□□ -1.95
LDB3O75112 RPL21P3-201ENST00000395517 478 ntBASIC2.84□□□□□ -1.95
LDB3O75112 SNORA11.1-201ENST00000408133 129 ntBASIC2.84□□□□□ -1.95
LDB3O75112 MIR548F4-201ENST00000408515 105 ntBASIC2.84□□□□□ -1.95
LDB3O75112 RNU6-1050P-201ENST00000410388 107 ntBASIC2.84□□□□□ -1.95
LDB3O75112 RN7SKP220-201ENST00000410611 288 ntBASIC2.84□□□□□ -1.95
LDB3O75112 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.84□□□□□ -1.95
LDB3O75112 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.84□□□□□ -1.95
LDB3O75112 ATG3P1-201ENST00000419507 911 ntBASIC2.84□□□□□ -1.95
LDB3O75112 AC243428.1-201ENST00000421099 264 ntBASIC2.84□□□□□ -1.95
LDB3O75112 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.84□□□□□ -1.95
LDB3O75112 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.84□□□□□ -1.95
LDB3O75112 RNU7-187P-201ENST00000458985 68 ntBASIC2.84□□□□□ -1.95
LDB3O75112 AC146507.2-201ENST00000460608 476 ntBASIC2.84□□□□□ -1.95
LDB3O75112 AC008716.1-201ENST00000511084 513 ntBASIC2.84□□□□□ -1.95
LDB3O75112 RNA5SP341-201ENST00000516261 117 ntBASIC2.84□□□□□ -1.95
LDB3O75112 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.84□□□□□ -1.95
LDB3O75112 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.84□□□□□ -1.95
LDB3O75112 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.84□□□□□ -1.95
LDB3O75112 MIR4503-201ENST00000582187 83 ntBASIC2.84□□□□□ -1.95
LDB3O75112 CYP2C61P-201ENST00000604072 290 ntBASIC2.84□□□□□ -1.95
LDB3O75112 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LDB3O75112 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.84□□□□□ -1.95
LDB3O75112 AL162274.2-201ENST00000614406 332 ntBASIC2.84□□□□□ -1.95
LDB3O75112 ATP5A1P2-202ENST00000616464 443 ntBASIC2.84□□□□□ -1.95
LDB3O75112 AC007318.2-201ENST00000620999 243 ntBASIC2.84□□□□□ -1.95
LDB3O75112 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.84□□□□□ -1.96
LDB3O75112 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LDB3O75112 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
LDB3O75112 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.83□□□□□ -1.96
LDB3O75112 AL353743.1-202ENST00000431724 1695 ntBASIC2.83□□□□□ -1.96
LDB3O75112 FTLP6-201ENST00000355274 422 ntBASIC2.83□□□□□ -1.96
LDB3O75112 RNU6-198P-201ENST00000384258 104 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms