Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.67□□□□□ -1.98
CACNA1FO60840 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.67□□□□□ -1.98
CACNA1FO60840 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.67□□□□□ -1.98
CACNA1FO60840 AC009318.2-201ENST00000610917 651 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.15-201ENST00000611544 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 DUSP12P1-201ENST00000612874 516 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 AC093838.1-201ENST00000613014 469 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.16-201ENST00000613119 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.12-201ENST00000613778 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.20-201ENST00000613956 192 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.9-201ENST00000615427 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.11-201ENST00000616345 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.2-201ENST00000616535 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.3-201ENST00000617785 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.19-201ENST00000618602 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 RNU2-1-201ENST00000618664 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.6-201ENST00000619225 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.5-201ENST00000619465 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 U2.10-201ENST00000620268 191 ntBASIC2.67□□□□□ -1.98
CACNA1FO60840 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC2.67□□□□□ -1.98
CACNA1FO60840 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.66□□□□□ -1.98
CACNA1FO60840 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CACNA1FO60840 Y_RNA.162-201ENST00000363683 102 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 RNU6-1227P-201ENST00000383981 107 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 Y_RNA.474-201ENST00000384341 102 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 Y_RNA.576-201ENST00000384781 102 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 MIR559-201ENST00000385188 96 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 RNA5SP111-201ENST00000411386 101 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.66□□□□□ -1.98
CACNA1FO60840 AC004866.2-201ENST00000438285 481 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 HMGN1P10-201ENST00000474557 553 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 RPL7P43-201ENST00000478876 753 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 RNU6-273P-201ENST00000516937 96 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 SUB1P1-201ENST00000524415 382 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC2.66□□□□□ -1.98
CACNA1FO60840 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.66□□□□□ -1.98
CACNA1FO60840 SNORD84-203ENST00000584275 78 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 AC023043.2-201ENST00000589678 1026 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 AL603758.1-201ENST00000618654 241 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.66□□□□□ -1.98
CACNA1FO60840 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.66□□□□□ -1.98
CACNA1FO60840 AC134503.1-201ENST00000633048 54 ntBASIC2.66□□□□□ -1.98
CACNA1FO60840 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
CACNA1FO60840 RNU6-188P-201ENST00000364207 107 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 RNU6-173P-201ENST00000364215 104 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 RNU6-522P-201ENST00000364497 107 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 SNORA3.2-201ENST00000408221 125 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 SNORA11.4-201ENST00000408823 129 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 UBE2FP1-201ENST00000416536 447 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.65□□□□□ -1.98
CACNA1FO60840 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.65□□□□□ -1.98
CACNA1FO60840 AC005534.2-201ENST00000431047 433 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 HMGB1P18-201ENST00000438801 619 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 RPL21P2-201ENST00000440049 481 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 MTCO3P45-201ENST00000443036 613 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AC020550.1-201ENST00000447385 163 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AC104058.1-201ENST00000448028 297 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AC007547.1-201ENST00000462177 490 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AC116562.3-201ENST00000506136 177 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.65□□□□□ -1.98
CACNA1FO60840 RNU6-1092P-201ENST00000516955 87 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 Y_RNA.718-201ENST00000517110 102 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AC068587.5-201ENST00000528506 175 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AP005435.4-201ENST00000529514 284 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AP003385.6-201ENST00000531603 374 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 SNRPGP16-201ENST00000533275 226 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.65□□□□□ -1.98
CACNA1FO60840 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.65□□□□□ -1.98
CACNA1FO60840 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.65□□□□□ -1.98
CACNA1FO60840 AL158827.2-201ENST00000602494 330 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AC016925.2-201ENST00000605108 242 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 AL691447.3-201ENST00000635020 330 ntBASIC2.65□□□□□ -1.98
CACNA1FO60840 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.65□□□□□ -1.99
CACNA1FO60840 UBE2L2-201ENST00000254302 429 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 RNU6-1287P-201ENST00000362914 107 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 Y_RNA.301-201ENST00000364990 103 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 Y_RNA.373-201ENST00000365600 103 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 Y_RNA.394-201ENST00000383942 103 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 RNU6-1060P-201ENST00000384664 107 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 AL591034.1-201ENST00000407447 340 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.65□□□□□ -1.99
CACNA1FO60840 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.65□□□□□ -1.99
CACNA1FO60840 HSPE1P1-201ENST00000421494 318 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.65□□□□□ -1.99
CACNA1FO60840 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.65□□□□□ -1.99
CACNA1FO60840 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.65□□□□□ -1.99
CACNA1FO60840 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.65□□□□□ -1.99
CACNA1FO60840 Y_RNA.632-201ENST00000459189 102 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 RNU6-1208P-201ENST00000459588 107 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 TRBV1-201ENST00000476502 284 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.65□□□□□ -1.99
CACNA1FO60840 AC092436.1-201ENST00000506450 503 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 FAM206BP-201ENST00000510179 541 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 RNU6-327P-201ENST00000516270 127 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 Y_RNA.689-201ENST00000516589 107 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.65□□□□□ -1.99
CACNA1FO60840 BNIP3P6-201ENST00000549284 499 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 SETP7-201ENST00000552169 453 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 MIR4703-201ENST00000577728 79 ntBASIC2.65□□□□□ -1.99
CACNA1FO60840 AC103810.1-201ENST00000579873 453 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms