Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 SNORD62.1-201ENST00000362541 86 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 RNU6-99P-201ENST00000364721 107 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 SNORA62.3-201ENST00000365110 153 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 RNU6-842P-201ENST00000384269 107 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 Z99755.1-201ENST00000414048 380 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 RPS29P4-201ENST00000414733 161 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 USMG5P1-201ENST00000425964 177 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC4.25□□□□□ -1.73
SMARCA5O60264 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC4.25□□□□□ -1.73
SMARCA5O60264 RPL21P2-201ENST00000440049 481 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.25□□□□□ -1.73
SMARCA5O60264 SLC25A15P5-201ENST00000508033 253 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 AC010265.1-201ENST00000513509 211 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 SNORD116.3-201ENST00000517176 78 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 AC025423.5-201ENST00000550230 219 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.25□□□□□ -1.73
SMARCA5O60264 AC012119.1-201ENST00000603184 222 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 AL133393.1-201ENST00000603277 287 ntBASIC4.25□□□□□ -1.73
SMARCA5O60264 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SMARCA5O60264 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SMARCA5O60264 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMARCA5O60264 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SMARCA5O60264 AL079305.1-201ENST00000623159 3008 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 SNORD14B-201ENST00000364533 90 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 RNU6-1303P-201ENST00000364841 107 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 RNU1-115P-201ENST00000365329 160 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 Y_RNA.428-201ENST00000384078 102 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 RNU6-750P-201ENST00000390946 107 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC4.24□□□□□ -1.73
SMARCA5O60264 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.24□□□□□ -1.73
SMARCA5O60264 RBMY2UP-201ENST00000453474 324 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 AL353752.1-201ENST00000454946 260 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 AC006026.2-201ENST00000457376 180 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 AC011005.2-201ENST00000487324 359 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 RPS27P26-201ENST00000494583 239 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.24□□□□□ -1.73
SMARCA5O60264 AC026784.1-201ENST00000507986 352 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.24□□□□□ -1.73
SMARCA5O60264 AC113155.1-201ENST00000511141 769 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 AC023442.1-201ENST00000531247 422 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 GNAI2P1-201ENST00000541815 315 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 AC026371.1-201ENST00000551867 419 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 RPL23AP78-201ENST00000599928 470 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.24□□□□□ -1.73
SMARCA5O60264 AC062037.2-201ENST00000610137 73 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 AC078938.1-201ENST00000620993 318 ntBASIC4.24□□□□□ -1.73
SMARCA5O60264 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.24□□□□□ -1.73
SMARCA5O60264 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
SMARCA5O60264 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SMARCA5O60264 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMARCA5O60264 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SMARCA5O60264 AC032011.1-201ENST00000611703 1549 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
SMARCA5O60264 AC138393.1-203ENST00000327086 343 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 Y_RNA.2-201ENST00000362330 96 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 Y_RNA.106-201ENST00000363189 100 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 Y_RNA.257-201ENST00000364596 102 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 MIR184-201ENST00000384962 84 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 RNU6-55P-201ENST00000411092 107 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 AC023141.4-201ENST00000412031 328 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 AL358075.3-201ENST00000426289 226 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 CEP57L1P1-201ENST00000430943 1201 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC4.23□□□□□ -1.73
SMARCA5O60264 SUMO1P3-201ENST00000439961 304 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC4.23□□□□□ -1.73
SMARCA5O60264 RNU7-187P-201ENST00000458985 68 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 AC006483.1-201ENST00000487308 313 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 RPL22P13-201ENST00000493291 347 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 AC092436.3-201ENST00000511788 257 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 Y_RNA.680-201ENST00000516441 93 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.23□□□□□ -1.73
SMARCA5O60264 AC006199.1-201ENST00000548728 219 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 AC005476.1-201ENST00000554427 397 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 AL355877.2-201ENST00000603670 358 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 SCARNA4-202ENST00000625402 129 ntBASIC4.23□□□□□ -1.73
SMARCA5O60264 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SMARCA5O60264 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC4.23□□□□□ -1.73
SMARCA5O60264 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.23□□□□□ -1.73
SMARCA5O60264 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
SMARCA5O60264 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SMARCA5O60264 RNU6-266P-201ENST00000364225 107 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 MIR218-2-201ENST00000385006 110 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 MIR10A-201ENST00000385043 110 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 RNA5SP31-201ENST00000411144 127 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC4.22□□□□□ -1.73
SMARCA5O60264 ARL5AP4-201ENST00000430731 512 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.22□□□□□ -1.73
SMARCA5O60264 CHEK2P4-201ENST00000450340 246 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 SUMO1P2-201ENST00000452524 304 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 RPS4XP2-201ENST00000458402 793 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 RPS29P12-201ENST00000460178 152 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.22□□□□□ -1.73
SMARCA5O60264 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SMARCA5O60264 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.22□□□□□ -1.73
SMARCA5O60264 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.22□□□□□ -1.73
SMARCA5O60264 MIR1254-2-201ENST00000579553 63 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 AC002044.1-201ENST00000606707 158 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 AC100812.1-201ENST00000607622 580 ntBASIC4.22□□□□□ -1.73
SMARCA5O60264 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms