Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 MIR449C-201ENST00000516047 92 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 RNA5SP490-201ENST00000517141 136 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AC091163.3-201ENST00000518269 1144 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.01□□□□□ -2.25
SSNA1O43805 AC087441.2-201ENST00000529141 262 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.01□□□□□ -2.25
SSNA1O43805 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.01□□□□□ -2.25
SSNA1O43805 AL138889.2-201ENST00000603883 242 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AL158211.2-201ENST00000607282 395 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 AC064859.1-201ENST00000624741 174 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 SCARNA4-202ENST00000625402 129 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 IGHVIII-44-202ENST00000636235 289 ntBASIC1.01□□□□□ -2.25
SSNA1O43805 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
SSNA1O43805 AC233981.2-201ENST00000611524 1614 ntBASIC1□□□□□ -2.25
SSNA1O43805 OR4G2P-201ENST00000328113 903 ntBASIC1□□□□□ -2.25
SSNA1O43805 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
SSNA1O43805 RNU6-723P-201ENST00000383973 107 ntBASIC1□□□□□ -2.25
SSNA1O43805 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
SSNA1O43805 AL357139.1-201ENST00000407792 426 ntBASIC1□□□□□ -2.25
SSNA1O43805 HMGB1P31-201ENST00000437242 427 ntBASIC1□□□□□ -2.25
SSNA1O43805 RPL7P36-201ENST00000444633 681 ntBASIC1□□□□□ -2.25
SSNA1O43805 RPS29P28-201ENST00000446439 141 ntBASIC1□□□□□ -2.25
SSNA1O43805 NDUFB1P2-201ENST00000449477 176 ntBASIC1□□□□□ -2.25
SSNA1O43805 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1□□□□□ -2.25
SSNA1O43805 RNU6-333P-201ENST00000459117 107 ntBASIC1□□□□□ -2.25
SSNA1O43805 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1□□□□□ -2.25
SSNA1O43805 AC097473.1-201ENST00000508142 408 ntBASIC1□□□□□ -2.25
SSNA1O43805 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1□□□□□ -2.25
SSNA1O43805 SNORA43.2-201ENST00000516652 128 ntBASIC1□□□□□ -2.25
SSNA1O43805 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1□□□□□ -2.25
SSNA1O43805 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC1□□□□□ -2.25
SSNA1O43805 MIR3937-201ENST00000580135 106 ntBASIC1□□□□□ -2.25
SSNA1O43805 MIR3146-201ENST00000580367 79 ntBASIC1□□□□□ -2.25
SSNA1O43805 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1□□□□□ -2.25
SSNA1O43805 AC174048.1-201ENST00000603389 144 ntBASIC1□□□□□ -2.25
SSNA1O43805 RNU6-88P-201ENST00000606801 100 ntBASIC1□□□□□ -2.25
SSNA1O43805 AC072039.2-201ENST00000608883 439 ntBASIC1□□□□□ -2.25
SSNA1O43805 FRG1KP-201ENST00000623592 341 ntBASIC1□□□□□ -2.25
SSNA1O43805 AL356596.1-201ENST00000624230 379 ntBASIC1□□□□□ -2.25
SSNA1O43805 MTND5P9-201ENST00000503854 1755 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 SNORA62.1-201ENST00000364287 154 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 RPL23AP32-201ENST00000395315 459 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 ERHP2-201ENST00000402323 299 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 MRPL35P1-201ENST00000404272 572 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 RNU6-174P-201ENST00000410406 106 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 OR6C66P-201ENST00000414917 930 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SSNA1O43805 HSPE1P9-201ENST00000440046 311 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
SSNA1O43805 OR2AQ1P-201ENST00000451972 200 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 AL122001.1-201ENST00000457027 370 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 AC068587.2-201ENST00000478386 781 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.99□□□□□ -2.25
SSNA1O43805 BNIP3P6-201ENST00000549284 499 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.99□□□□□ -2.25
SSNA1O43805 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC0.99□□□□□ -2.25
SSNA1O43805 AL391001.1-201ENST00000602747 715 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 MIR92B-201ENST00000607575 96 ntBASIC0.99□□□□□ -2.25
SSNA1O43805 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.99□□□□□ -2.25
SSNA1O43805 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.99□□□□□ -2.25
SSNA1O43805 Y_RNA.332-201ENST00000365271 113 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SSNA1O43805 MIR548B-201ENST00000385247 97 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 RPS3AP36-201ENST00000398190 775 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 RNU2-62P-201ENST00000410868 191 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 RNU2-72P-201ENST00000411175 163 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 AC069282.1-201ENST00000411911 526 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.98□□□□□ -2.25
SSNA1O43805 BTF3L4P1-201ENST00000413813 468 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 AL590556.1-201ENST00000423231 483 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 RPL23AP30-201ENST00000432419 501 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 AL008629.1-201ENST00000438615 184 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 HMGN2P18-201ENST00000450680 270 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 RNU1-131P-201ENST00000458943 161 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 MTND2P33-201ENST00000506452 1031 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 AC010587.2-201ENST00000511727 448 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 SNORA19.3-201ENST00000516165 130 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC0.98□□□□□ -2.25
SSNA1O43805 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.98□□□□□ -2.25
SSNA1O43805 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.98□□□□□ -2.25
SSNA1O43805 CYP3A52P-201ENST00000563326 91 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.98□□□□□ -2.25
SSNA1O43805 AC091135.1-201ENST00000585943 307 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
SSNA1O43805 AC013412.1-201ENST00000610687 192 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 AC009318.2-201ENST00000610917 651 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 PART1_2.1-201ENST00000612397 250 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 uc_338.12-201ENST00000616344 181 ntBASIC0.98□□□□□ -2.25
SSNA1O43805 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.97□□□□□ -2.25
SSNA1O43805 MIR513A1-201ENST00000385138 129 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 RN7SKP192-201ENST00000411291 327 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 RPL37P10-201ENST00000412884 288 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.97□□□□□ -2.25
SSNA1O43805 C8orf59P1-201ENST00000429930 303 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC0.97□□□□□ -2.25
SSNA1O43805 DYNLT3P2-201ENST00000442517 295 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 RPL32P28-201ENST00000443577 397 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.97□□□□□ -2.25
SSNA1O43805 RPS27AP8-201ENST00000452665 445 ntBASIC0.97□□□□□ -2.25
SSNA1O43805 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.97□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms