Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU6-190P-201ENST00000384154 102 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR518D-201ENST00000385014 87 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 SNORA40C-201ENST00000391285 128 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU2-2P-201ENST00000410396 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL160275.3-201ENST00000423876 471 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 HMGB1P27-201ENST00000431429 603 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC000111.3-201ENST00000433478 193 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL451074.3-201ENST00000437709 472 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC079781.2-201ENST00000446424 169 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL360271.2-201ENST00000447710 161 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 MTATP6P7-201ENST00000453315 681 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL162395.1-201ENST00000457882 422 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 RPL31P41-201ENST00000477967 372 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 HMGB1P29-201ENST00000505659 499 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 COX6CP5-201ENST00000527162 228 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC022880.1-201ENST00000534017 973 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 MIR4658-201ENST00000584344 65 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC078795.2-201ENST00000602835 1252 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AP000942.3-201ENST00000603702 160 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC016727.1-205ENST00000605437 569 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AL139286.2-201ENST00000606838 396 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC017083.3-201ENST00000609955 700 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.15-201ENST00000611544 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.16-201ENST00000613119 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.12-201ENST00000613778 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.20-201ENST00000613956 192 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC004852.3-201ENST00000614131 326 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.9-201ENST00000615427 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.11-201ENST00000616345 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.2-201ENST00000616535 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.3-201ENST00000617785 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.19-201ENST00000618602 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 RNU2-1-201ENST00000618664 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.6-201ENST00000619225 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.5-201ENST00000619465 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 U2.10-201ENST00000620268 191 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC068792.1-201ENST00000621354 417 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 AC091932.3-201ENST00000624223 323 ntBASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
TMX2-CTNND1H3BSU7 ZNF680P1-201ENST00000436625 1469 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNORD3E-201ENST00000362899 217 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-166P-201ENST00000384371 107 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-456P-201ENST00000384493 107 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR578-201ENST00000384828 96 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 SUMO2P12-201ENST00000405924 140 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 NDUFS5P4-201ENST00000412983 318 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL356379.1-201ENST00000414105 126 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 RPL26P27-201ENST00000414397 437 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 MTATP6P18-201ENST00000417994 673 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL358075.3-201ENST00000426289 226 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 HMGN2P10-201ENST00000448085 265 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 RN7SL274P-201ENST00000492268 272 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 SUB1P2-201ENST00000556401 297 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL157871.3-201ENST00000557231 293 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 ANP32BP3-201ENST00000559213 706 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC023824.2-201ENST00000566185 400 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 MIR3117-201ENST00000584034 78 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC005261.5-201ENST00000596280 355 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC068790.2-201ENST00000602601 557 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC073648.5-201ENST00000603502 305 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 Z84480.1-201ENST00000605131 311 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AP001596.2-201ENST00000608410 312 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL031601.2-202ENST00000622650 282 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL359740.1-201ENST00000624340 592 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AL512643.1-201ENST00000635735 524 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC068137.4-201ENST00000638485 296 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 AC110491.1-201ENST00000562191 2010 ntBASIC1.9□□□□□ -2.11
TMX2-CTNND1H3BSU7 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-179P-201ENST00000363350 107 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 SNORA62.1-201ENST00000364287 154 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU6-384P-201ENST00000364900 104 ntBASIC1.89□□□□□ -2.11
TMX2-CTNND1H3BSU7 RNU4-48P-201ENST00000365559 182 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms