Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC-0.39□□□□□ -2.47
LINC01549A6NIU2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.39□□□□□ -2.47
LINC01549A6NIU2 RPL31P53-201ENST00000457065 348 ntBASIC-0.39□□□□□ -2.47
LINC01549A6NIU2 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC-0.39□□□□□ -2.47
LINC01549A6NIU2 BPTFP1-201ENST00000579209 492 ntBASIC-0.39□□□□□ -2.47
LINC01549A6NIU2 AC005858.4-201ENST00000623191 700 ntBASIC-0.39□□□□□ -2.47
LINC01549A6NIU2 RNA5SP493-201ENST00000364115 91 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 USP9YP19-201ENST00000412165 485 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 USP9YP13-201ENST00000417797 480 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 HMGN2P34-201ENST00000437647 269 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 AL441985.1-201ENST00000457727 251 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 snoU13.25-201ENST00000458945 104 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 AC112771.1-201ENST00000463581 102 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 MTND1P22-201ENST00000510572 951 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 SUMO2P16-201ENST00000519475 264 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 ZNF705CP-201ENST00000530515 889 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 AP002906.1-201ENST00000603405 233 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 AC011939.3-201ENST00000613686 466 ntBASIC-0.4□□□□□ -2.47
LINC01549A6NIU2 RNU6-1335P-201ENST00000365426 107 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 RNU6-444P-201ENST00000383988 108 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 RNU6-514P-201ENST00000384208 107 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 MIR23A-201ENST00000385245 73 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 RNA5SP63-201ENST00000391225 112 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 AF228730.1-201ENST00000397972 663 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 BEND7P1-201ENST00000422058 457 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 SKA2P1-201ENST00000425592 390 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 MTND2P24-201ENST00000453434 806 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 AC112220.2-201ENST00000605513 533 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 MTND1P37-201ENST00000636562 264 ntBASIC-0.41□□□□□ -2.48
LINC01549A6NIU2 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 RNA5SP214-201ENST00000363378 118 ntBASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 RNU6-163P-201ENST00000384396 106 ntBASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 ATP5F1P6-201ENST00000402768 767 ntBASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 AL096829.2-201ENST00000446582 742 ntBASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 SNRPGP12-201ENST00000449481 213 ntBASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 AC009318.4-201ENST00000620496 486 ntBASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 U2.21-201ENST00000637295 81 ntBASIC-0.42□□□□□ -2.48
LINC01549A6NIU2 ZNF849P-201ENST00000594711 1566 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 RNU6-778P-201ENST00000363269 103 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 MIR520A-201ENST00000384862 85 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 AC007919.1-201ENST00000429380 217 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 TRAPPC13P1-201ENST00000435991 1062 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 AC099677.2-201ENST00000436385 175 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 AC104629.2-201ENST00000468627 598 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 AC048334.1-201ENST00000477975 159 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 RNU5A-4P-201ENST00000516588 111 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 MIR5094-201ENST00000578766 85 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 AC025627.3-201ENST00000582078 182 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 AL031667.3-201ENST00000620124 655 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 AC022513.1-201ENST00000624512 117 ntBASIC-0.43□□□□□ -2.48
LINC01549A6NIU2 SNORA80D-201ENST00000384488 135 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 RNU6-160P-201ENST00000384591 107 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 MIR649-201ENST00000384843 97 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 MIR518A1-201ENST00000385068 85 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AL022400.1-201ENST00000423946 935 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 RSL24D1P8-201ENST00000434442 492 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AL008629.1-201ENST00000438615 184 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AC022861.1-201ENST00000522981 663 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AC016957.1-201ENST00000534895 309 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AC141557.1-201ENST00000540982 400 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AL353149.1-201ENST00000610667 244 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 AC080188.3-201ENST00000624842 748 ntBASIC-0.44□□□□□ -2.48
LINC01549A6NIU2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 RNU4-48P-201ENST00000365559 182 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 SNORA36.2-201ENST00000384004 127 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 RNA5SP111-201ENST00000411386 101 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 LINC01347-201ENST00000417964 355 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 AL031313.1-201ENST00000448435 256 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 MTCYBP1-201ENST00000454315 1119 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 GTF2IP12-201ENST00000456547 356 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 RNA5SP481-201ENST00000516814 122 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 AC104417.1-201ENST00000523974 751 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 AP003072.2-201ENST00000527756 676 ntBASIC-0.45□□□□□ -2.48
LINC01549A6NIU2 AL357312.1-201ENST00000603879 298 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 200 ms