Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RPL21P2-201ENST00000440049 481 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 GPM6BP1-201ENST00000446387 144 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RNU1-86P-201ENST00000516108 154 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.670-201ENST00000516255 105 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 MIR892C-201ENST00000516410 77 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RNU1-107P-201ENST00000516617 154 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RNU6-988P-201ENST00000519081 107 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 AC011602.1-201ENST00000546484 331 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RNU6-85P-201ENST00000605989 107 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 MIR6076-201ENST00000617521 113 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 SNORD39.4-201ENST00000620099 78 ntBASIC3.42□□□□□ -1.86
DKK3Q9UBP4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.42□□□□□ -1.86
DKK3Q9UBP4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.41□□□□□ -1.86
DKK3Q9UBP4 MIR412-201ENST00000362142 91 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.404-201ENST00000383978 102 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AL035666.1-201ENST00000446195 348 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AL031183.1-201ENST00000457667 207 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.41□□□□□ -1.86
DKK3Q9UBP4 RPL23AP67-201ENST00000465341 474 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 RN7SL283P-201ENST00000489055 303 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 RNU6-56P-201ENST00000516986 93 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AC068657.1-201ENST00000520807 306 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AC104984.5-201ENST00000586878 94 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 OR1M4P-201ENST00000589199 287 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AC078899.3-201ENST00000599065 212 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 NUTF2P8-201ENST00000604593 363 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 ELOCP5-201ENST00000604924 333 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 CUL1P1-201ENST00000509510 2425 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 Z83843.1-201ENST00000604070 3685 ntBASIC3.41□□□□□ -1.86
DKK3Q9UBP4 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
DKK3Q9UBP4 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
DKK3Q9UBP4 AC093010.3-201ENST00000570269 15214 ntBASIC3.4□□□□□ -1.86
DKK3Q9UBP4 AC058791.1-201ENST00000608412 3198 ntBASIC3.4□□□□□ -1.86
DKK3Q9UBP4 Y_RNA.252-201ENST00000364556 101 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 RNU6-890P-201ENST00000384121 107 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 U3.19-201ENST00000390893 196 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 MIR1289-1-201ENST00000408836 144 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 RN7SKP123-201ENST00000410732 291 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 AC010401.1-201ENST00000463867 348 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 RN7SL429P-201ENST00000479090 223 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 RN7SL489P-201ENST00000486185 223 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 RN7SL327P-201ENST00000488659 223 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 RNA5SP290-201ENST00000517133 127 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 RNA5SP291-201ENST00000517222 105 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 AC011494.1-201ENST00000596454 237 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 RN7SL853P-201ENST00000617250 223 ntBASIC3.4□□□□□ -1.87
DKK3Q9UBP4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.4□□□□□ -1.87
DKK3Q9UBP4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AC017071.1-201ENST00000564407 2204 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 Y_RNA.510-201ENST00000384511 114 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AL096701.2-201ENST00000416920 238 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AC005326.1-201ENST00000429197 123 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AC009237.8-201ENST00000445492 379 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 RPS4XP2-201ENST00000458402 793 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AC009902.1-201ENST00000519351 183 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 TRAV28-201ENST00000557548 323 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 MIR4276-201ENST00000584832 70 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AC136443.5-201ENST00000603741 370 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AP000942.4-201ENST00000604811 241 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AL137843.1-201ENST00000605078 385 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AL591516.1-201ENST00000611326 274 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
DKK3Q9UBP4 MTND5P30-201ENST00000452896 1731 ntBASIC3.39□□□□□ -1.87
DKK3Q9UBP4 AL049641.1-201ENST00000441055 1948 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RNU1-75P-201ENST00000347264 129 ntBASIC3.38□□□□□ -1.87
DKK3Q9UBP4 RNU6-384P-201ENST00000364900 104 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms