Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DNMT3BQ9UBC3 AC078795.3-201ENST00000602913 472 ntBASIC3.32□□□□□ -1.88
DNMT3BQ9UBC3 AL359757.2-201ENST00000624309 274 ntBASIC3.32□□□□□ -1.88
DNMT3BQ9UBC3 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DNMT3BQ9UBC3 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.32□□□□□ -1.88
DNMT3BQ9UBC3 SNORD62.1-201ENST00000362541 86 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 Y_RNA.132-201ENST00000363421 102 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 Y_RNA.259-201ENST00000364619 101 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 SNORA54-201ENST00000384281 123 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 RNA5SP38-201ENST00000410750 119 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 SNORD56-201ENST00000413522 71 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 ATG3P1-201ENST00000419507 911 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC093151.1-201ENST00000427711 313 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AL031274.1-201ENST00000450334 232 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC006026.2-201ENST00000457376 180 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 snoU109.2-201ENST00000459316 135 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC113155.1-201ENST00000511141 769 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 Y_RNA.687-201ENST00000516558 91 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 RNU6-1016P-201ENST00000516689 94 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC009812.2-201ENST00000517657 457 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 MIR5690-201ENST00000583739 73 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AL133255.1-201ENST00000606374 441 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AC064836.2-201ENST00000609491 462 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 MIR7106-201ENST00000612419 65 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 uc_338.25-201ENST00000613756 156 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 AL021368.2-201ENST00000606125 5352 ntBASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
DNMT3BQ9UBC3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AP001148.1-201ENST00000624124 2359 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 Y_RNA.315-201ENST00000365117 102 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 RNU6-72P-201ENST00000384285 79 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 U3.37-201ENST00000408528 213 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AC245054.2-201ENST00000415639 319 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 RPS15AP10-201ENST00000432472 382 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AC125238.1-201ENST00000448842 249 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 RPL23AP62-201ENST00000463396 453 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AP000867.2-201ENST00000532468 320 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AL391261.3-201ENST00000557194 520 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 MTND4LP5-201ENST00000605152 292 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AL161629.2-201ENST00000615347 275 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 MTND4LP32-201ENST00000636111 270 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 AL353746.1-201ENST00000566293 6881 ntBASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
DNMT3BQ9UBC3 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 SNORA71.1-201ENST00000364523 117 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 RNU5E-7P-201ENST00000365290 117 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 RNU6-898P-201ENST00000365627 104 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 Z98749.2-208ENST00000381646 500 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 MTCYBP4-201ENST00000401524 249 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 RN7SKP220-201ENST00000410611 288 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 HIGD1AP2-201ENST00000446367 280 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 RNU6-1037P-201ENST00000459571 107 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 RPL23AP45-201ENST00000476406 468 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 RPS4XP22-201ENST00000480755 780 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 RPS27AP10-201ENST00000496103 208 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 Y_RNA.718-201ENST00000517110 102 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AP004607.1-201ENST00000524456 203 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AL161423.1-201ENST00000613700 262 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 AC084781.2-201ENST00000615568 161 ntBASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 MIR622-201ENST00000638396 96 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms