Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 NDUFA5P4-201ENST00000436704 385 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 NDUFB1P2-201ENST00000449477 176 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AC117503.1-201ENST00000472241 394 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AC011005.2-201ENST00000487324 359 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 SNORA19.2-201ENST00000516013 114 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 RNU4-49P-201ENST00000516080 140 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 RNU6-1069P-201ENST00000516612 133 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 RNU6-572P-201ENST00000516724 80 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 RNU6-703P-201ENST00000516946 107 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 SNORA25.17-201ENST00000517184 124 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 RN7SKP256-201ENST00000517201 314 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AP000763.2-201ENST00000540641 163 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 MIR4742-201ENST00000581069 85 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AC002044.1-201ENST00000606707 158 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AC005858.4-201ENST00000623191 700 ntBASIC2.62□□□□□ -1.99
SIX2Q9NPC8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SIX2Q9NPC8 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNU6-778P-201ENST00000363269 103 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SNORD113-7-201ENST00000363762 77 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNA5SP68-201ENST00000363885 119 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNU6-884P-201ENST00000363889 107 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNU6-266P-201ENST00000364225 107 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SNORD14B-201ENST00000364533 90 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNU6-7-201ENST00000364784 107 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNU6-384P-201ENST00000364900 104 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SNORD81.2-201ENST00000365153 76 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNU6-8-201ENST00000365467 107 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNU6-166P-201ENST00000384371 107 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SNORA41-201ENST00000384675 132 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 MIR591-201ENST00000385290 95 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNU6-1009P-201ENST00000390996 107 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AL359511.1-201ENST00000402970 211 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RN7SKP32-201ENST00000410167 303 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNA5SP38-201ENST00000410750 119 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 Y_RNA.623-201ENST00000411128 95 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 MTND3P8-201ENST00000412909 339 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RPL26P27-201ENST00000414397 437 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AC099548.1-201ENST00000421443 426 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SKA2P1-201ENST00000425592 390 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SNRPEP8-201ENST00000442866 260 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AL583843.1-201ENST00000456070 346 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNU6-329P-201ENST00000459618 107 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RPL23AP45-201ENST00000476406 468 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SNORA31.1-201ENST00000515993 133 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SNORA31.5-201ENST00000516190 133 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 MIR892C-201ENST00000516410 77 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 RNA5SP148-201ENST00000516527 94 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 CYCSP27-201ENST00000527643 293 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SCOCP1-201ENST00000554676 349 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AC074050.1-201ENST00000563247 211 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AC005261.5-201ENST00000596280 355 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AL357078.3-201ENST00000607528 618 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AC067747.1-201ENST00000608026 250 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AL121757.2-201ENST00000611223 313 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 Y_RNA.804-201ENST00000615262 101 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 MIR6817-201ENST00000615588 66 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AL138880.2-201ENST00000616214 239 ntBASIC2.61□□□□□ -1.99
SIX2Q9NPC8 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX2Q9NPC8 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 RNU6-254P-201ENST00000363377 107 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 RNU1-73P-201ENST00000383971 164 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 RNU2-41P-201ENST00000410991 178 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC009963.1-201ENST00000417265 157 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 HMGN2P30-201ENST00000423237 256 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC007560.1-201ENST00000426912 237 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AL078601.1-201ENST00000444542 271 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 MTATP6P7-201ENST00000453315 681 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC2.6□□□□□ -1.99
SIX2Q9NPC8 AC092798.1-201ENST00000458542 409 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 TRBVA-201ENST00000498804 316 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 RNU6-864P-201ENST00000516256 108 ntBASIC2.6□□□□□ -1.99
SIX2Q9NPC8 RNU1-103P-201ENST00000516502 125 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms