Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC116347.2-201ENST00000514912 523 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AC110588.1-201ENST00000559699 137 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 MIR3169-201ENST00000578032 83 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 MIR548AC-201ENST00000585049 88 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AC112187.2-201ENST00000604345 283 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AC121334.2-201ENST00000605387 271 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AP002360.4-201ENST00000606980 481 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 RNU4-5P-201ENST00000607255 135 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AC018645.2-201ENST00000609151 472 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AL590240.4-201ENST00000616908 390 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 U6.42-201ENST00000618440 107 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 AC007792.1-201ENST00000623023 402 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 SCARNA4-202ENST00000625402 129 ntBASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.35□□□□□ -2.19
VCX3AQ9NNX9 MTND4P23-201ENST00000447723 1363 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 RNU6-931P-201ENST00000363850 107 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 SNORD114-6-201ENST00000364393 72 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 Y_RNA.302-201ENST00000364997 102 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 RNU6-157P-201ENST00000383957 107 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 RNU6-1179P-201ENST00000384667 107 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 AC114491.1-201ENST00000416095 246 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 AC006366.1-201ENST00000422002 759 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 AL365400.1-201ENST00000431854 640 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 HMGB1P31-201ENST00000437242 427 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 RPL7P54-201ENST00000438336 674 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 KATNBL1P3-201ENST00000443475 909 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 AC007677.1-201ENST00000445757 515 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 MTATP6P14-201ENST00000455189 673 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 RPL31P58-201ENST00000469001 379 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 AC011979.2-201ENST00000527568 352 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 RMST_6.1-201ENST00000611980 203 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 AC010149.2-201ENST00000637608 315 ntBASIC1.34□□□□□ -2.19
VCX3AQ9NNX9 AC006026.1-201ENST00000444025 1803 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 RNU6-809P-201ENST00000384461 107 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 SNORA48.2-201ENST00000390926 124 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 UBE2V1P2-201ENST00000397758 440 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AL355143.1-201ENST00000407101 841 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 BTF3L4P1-201ENST00000413813 468 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 MTCO2P21-201ENST00000419780 677 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 DPH3P2-201ENST00000422618 250 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AL590365.1-201ENST00000450788 243 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AL122001.1-201ENST00000457027 370 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 snoU109.3-201ENST00000459477 145 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 MTCO3P9-201ENST00000506989 781 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 RNU7-51P-201ENST00000516560 62 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AC137800.2-201ENST00000574375 120 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AP001485.1-201ENST00000604799 199 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AL158050.2-201ENST00000605336 568 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 PRR13P7-201ENST00000605538 430 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AC025754.2-201ENST00000606491 432 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 MIR92B-201ENST00000607575 96 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 MIR8074-201ENST00000615081 81 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AL607023.1-201ENST00000620045 248 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AL049777.1-201ENST00000622740 518 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 AC002543.1-201ENST00000299783 1954 ntBASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
VCX3AQ9NNX9 RNU6-160P-201ENST00000384591 107 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 MIR758-201ENST00000390227 88 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 RNU2-41P-201ENST00000410991 178 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 NCOR1P3-201ENST00000420479 303 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 CBX3P6-201ENST00000430257 527 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 AL354941.1-201ENST00000438600 464 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 MTND2P4-201ENST00000445034 1004 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 MTND1P12-201ENST00000455231 147 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 RNU6-123P-201ENST00000516163 102 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 AP003034.1-201ENST00000534621 422 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 AP002770.2-201ENST00000543613 532 ntBASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.32□□□□□ -2.2
VCX3AQ9NNX9 ZNF519P3-201ENST00000557158 1032 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 125.3 ms