Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RN7SKP156-201ENST00000410308 342 ntBASIC4.79□□□□□ -1.64
EFCC1Q9HA90 AC007919.1-201ENST00000429380 217 ntBASIC4.79□□□□□ -1.64
EFCC1Q9HA90 RNU1-95P-201ENST00000516357 160 ntBASIC4.79□□□□□ -1.64
EFCC1Q9HA90 RNU1-128P-201ENST00000516704 160 ntBASIC4.79□□□□□ -1.64
EFCC1Q9HA90 MTND5P41-201ENST00000517498 206 ntBASIC4.79□□□□□ -1.64
EFCC1Q9HA90 ATP5F1P5-201ENST00000526403 760 ntBASIC4.79□□□□□ -1.64
EFCC1Q9HA90 MRPS36P4-201ENST00000534436 298 ntBASIC4.79□□□□□ -1.64
EFCC1Q9HA90 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.79□□□□□ -1.64
EFCC1Q9HA90 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
EFCC1Q9HA90 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
EFCC1Q9HA90 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC4.79□□□□□ -1.64
EFCC1Q9HA90 AC135776.4-201ENST00000624300 1904 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 RNU6-1301P-201ENST00000362724 104 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 RNU6-1081P-201ENST00000384537 107 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 MIR514A1-201ENST00000385133 98 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 SNORD66.1-201ENST00000391230 76 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 Z98941.1-201ENST00000407764 100 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 AL358472.1-201ENST00000431295 329 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 PPIAP15-201ENST00000479662 484 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 AC139453.3-201ENST00000493276 369 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 AC090617.3-201ENST00000573670 475 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 SNORD84-203ENST00000584275 78 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 AC006065.5-201ENST00000623427 349 ntBASIC4.78□□□□□ -1.64
EFCC1Q9HA90 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.78□□□□□ -1.64
EFCC1Q9HA90 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.77□□□□□ -1.65
EFCC1Q9HA90 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
EFCC1Q9HA90 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.77□□□□□ -1.65
EFCC1Q9HA90 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EFCC1Q9HA90 RNU6-704P-201ENST00000364162 103 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 RNU6-923P-201ENST00000364753 107 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 Y_RNA.304-201ENST00000365011 112 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 RNY4P28-201ENST00000365281 93 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 SNORD113-1-201ENST00000365321 69 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 SNORA5A-201ENST00000384111 134 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 RNU6-843P-201ENST00000384454 104 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 RNU1-89P-201ENST00000384592 164 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 MIR30B-201ENST00000384850 88 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 MIR613-201ENST00000385248 95 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 Y_RNA.590-201ENST00000410140 107 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC4.77□□□□□ -1.65
EFCC1Q9HA90 AC104164.2-201ENST00000496953 495 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 MLLT10P2-201ENST00000506434 249 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 MIR2355-201ENST00000517199 87 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 AC005476.1-201ENST00000554427 397 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.77□□□□□ -1.65
EFCC1Q9HA90 FAM60BP-201ENST00000578364 658 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.77□□□□□ -1.65
EFCC1Q9HA90 AL162424.1-201ENST00000602325 221 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 AC037487.3-201ENST00000606668 112 ntBASIC4.77□□□□□ -1.65
EFCC1Q9HA90 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EFCC1Q9HA90 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
EFCC1Q9HA90 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
EFCC1Q9HA90 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EFCC1Q9HA90 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
EFCC1Q9HA90 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EFCC1Q9HA90 RHEBP3-201ENST00000411920 351 ntBASIC4.76□□□□□ -1.65
EFCC1Q9HA90 RPS12P23-201ENST00000419579 400 ntBASIC4.76□□□□□ -1.65
EFCC1Q9HA90 AL627311.1-201ENST00000431514 115 ntBASIC4.76□□□□□ -1.65
EFCC1Q9HA90 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.76□□□□□ -1.65
EFCC1Q9HA90 SNORA70.14-201ENST00000516205 110 ntBASIC4.76□□□□□ -1.65
EFCC1Q9HA90 AP006245.1-201ENST00000522549 120 ntBASIC4.76□□□□□ -1.65
EFCC1Q9HA90 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.76□□□□□ -1.65
EFCC1Q9HA90 MIR5195-201ENST00000583555 115 ntBASIC4.76□□□□□ -1.65
EFCC1Q9HA90 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
EFCC1Q9HA90 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
EFCC1Q9HA90 AC233981.2-201ENST00000611524 1614 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 BX322639.1-202ENST00000423987 2213 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 Y_RNA.245-201ENST00000364493 95 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 RNU6-336P-201ENST00000364891 107 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 RNU5E-7P-201ENST00000365290 117 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 RNU1-44P-201ENST00000384453 163 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 BTF3L4P2-201ENST00000392798 346 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 UBA52P6-201ENST00000399822 382 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 HSPE1P12-201ENST00000412576 301 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.75□□□□□ -1.65
EFCC1Q9HA90 HMGN2P31-201ENST00000432430 273 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 snoU13.30-201ENST00000458951 104 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 AC108145.1-201ENST00000503770 153 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 RNY3P16-201ENST00000516338 101 ntBASIC4.75□□□□□ -1.65
EFCC1Q9HA90 RNU2-31P-201ENST00000516954 155 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms