Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 AC010265.1-201ENST00000513509 211 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 Y_RNA.673-201ENST00000516306 88 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 RNA5SP315-201ENST00000516340 116 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 MIR2114-201ENST00000516645 80 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 SNORD59.2-201ENST00000516873 68 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 RNA5SP312-201ENST00000517068 116 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 IGKV2-38-201ENST00000517443 247 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 CYCSP39-201ENST00000565821 309 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 MIR92B-201ENST00000607575 96 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 SDR42E1P4-201ENST00000620894 481 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 AL773545.4-201ENST00000637262 310 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 MIR492-201ENST00000638676 116 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 AL513478.4-201ENST00000641636 310 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 UBE3AP2-201ENST00000429033 2259 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 AC110491.1-201ENST00000562191 2010 ntBASIC3.82□□□□□ -1.8
YIPF4Q9BSR8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 FAM35DP-201ENST00000323387 2712 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 RN7SKP280-201ENST00000364196 304 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 RNU1-13P-201ENST00000384499 162 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 MIR215-201ENST00000384858 110 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 MIR628-201ENST00000385229 95 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 MIR134-201ENST00000385258 73 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 BPY2DP-201ENST00000422208 265 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 OR4C10P-201ENST00000434991 931 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AC034236.1-201ENST00000469891 373 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AC109479.2-201ENST00000517842 174 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AL590705.4-201ENST00000532209 134 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AC025627.2-201ENST00000576220 160 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AC006077.1-201ENST00000604746 343 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AL391261.4-201ENST00000616012 481 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AP001282.2-201ENST00000616149 309 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 AC141273.2-201ENST00000618989 130 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 MIR8059-201ENST00000620427 81 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 LINC02471-203ENST00000641941 4752 ntBASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.81□□□□□ -1.8
YIPF4Q9BSR8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 Y_RNA.123-201ENST00000363338 102 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 Y_RNA.183-201ENST00000363882 113 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 SNORA14A-201ENST00000364773 135 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 Y_RNA.405-201ENST00000383979 100 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 Y_RNA.451-201ENST00000384200 100 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 Y_RNA.458-201ENST00000384240 102 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 RNU6-72P-201ENST00000384285 79 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 Y_RNA.524-201ENST00000384564 100 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 Y_RNA.561-201ENST00000384694 100 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 SNORA12.2-201ENST00000391040 156 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 AL138878.1-201ENST00000405131 347 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 MTCO3P19-201ENST00000415864 321 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 RPL23AP22-201ENST00000437556 453 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 RPL39P38-201ENST00000467018 153 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 AC067942.3-201ENST00000512025 362 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 MIR5684-201ENST00000585074 65 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 RPS29P30-201ENST00000600975 111 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 AC073410.2-201ENST00000603240 332 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 AC010900.2-201ENST00000604508 210 ntBASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.8□□□□□ -1.8
YIPF4Q9BSR8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
YIPF4Q9BSR8 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
YIPF4Q9BSR8 MTND5P6-201ENST00000422338 1798 ntBASIC3.79□□□□□ -1.8
YIPF4Q9BSR8 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
YIPF4Q9BSR8 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
YIPF4Q9BSR8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.79□□□□□ -1.8
YIPF4Q9BSR8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
YIPF4Q9BSR8 RNU6-227P-201ENST00000362865 103 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms