Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AC008526.1-201ENST00000509149 338 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 SMURF2P1-201ENST00000514992 481 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC2.81□□□□□ -1.96
SDF4Q9BRK5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.81□□□□□ -1.96
SDF4Q9BRK5 AP003034.1-201ENST00000534621 422 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 BNIP3P6-201ENST00000549284 499 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 MTCO3P23-201ENST00000561363 289 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 MTND1P15-201ENST00000579262 949 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 AC017083.3-201ENST00000609955 700 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 Z99129.1-201ENST00000612510 255 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 HMGB1P24-202ENST00000615653 685 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 AC005858.4-201ENST00000623191 700 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 AC022418.1-201ENST00000624118 445 ntBASIC2.81□□□□□ -1.96
SDF4Q9BRK5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.81□□□□□ -1.96
SDF4Q9BRK5 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.81□□□□□ -1.96
SDF4Q9BRK5 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SDF4Q9BRK5 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SDF4Q9BRK5 OR56A5-201ENST00000340110 738 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 RNU6-1010P-201ENST00000362757 107 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 SNORD114-19-201ENST00000363072 75 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 RNU2-66P-201ENST00000410650 161 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 AL096701.2-201ENST00000416920 238 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 RPL7P12-201ENST00000446719 750 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 AC012308.1-201ENST00000451232 178 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 AP001025.1-201ENST00000486139 332 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.8□□□□□ -1.96
SDF4Q9BRK5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.8□□□□□ -1.96
SDF4Q9BRK5 SNORA31.23-201ENST00000517219 133 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 AC109329.1-201ENST00000518744 317 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 AP003392.2-201ENST00000527269 208 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.8□□□□□ -1.96
SDF4Q9BRK5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.8□□□□□ -1.96
SDF4Q9BRK5 MTCYBP33-201ENST00000575007 1130 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 MTATP6P3-201ENST00000581686 676 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.8□□□□□ -1.96
SDF4Q9BRK5 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.8□□□□□ -1.96
SDF4Q9BRK5 Z69720.2-201ENST00000624755 279 ntBASIC2.8□□□□□ -1.96
SDF4Q9BRK5 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
SDF4Q9BRK5 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.8□□□□□ -1.96
SDF4Q9BRK5 MTND5P26-201ENST00000426018 1752 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.79□□□□□ -1.96
SDF4Q9BRK5 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.79□□□□□ -1.96
SDF4Q9BRK5 RNA5SP126-201ENST00000365092 109 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 Y_RNA.324-201ENST00000365165 102 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 RNU6-259P-201ENST00000383999 107 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 RNU6-622P-201ENST00000384272 103 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 SNORD116-20-201ENST00000384529 92 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 SNORA67.4-201ENST00000384688 142 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 AL359511.1-201ENST00000402970 211 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 RNU4-55P-201ENST00000410731 137 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 OR9R1P-201ENST00000412200 877 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 AC074117.2-201ENST00000417130 397 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 AC009963.1-201ENST00000417265 157 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 AL353193.1-201ENST00000421444 268 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.79□□□□□ -1.96
SDF4Q9BRK5 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.79□□□□□ -1.96
SDF4Q9BRK5 AC010975.2-201ENST00000427781 588 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 USP9YP14-201ENST00000430663 563 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.79□□□□□ -1.96
SDF4Q9BRK5 SNRPFP3-201ENST00000457792 225 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 SCARNA18-201ENST00000459004 134 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 AC079140.5-201ENST00000507882 310 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 MTND3P5-201ENST00000512798 333 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 RNU2-69P-201ENST00000516061 100 ntBASIC2.79□□□□□ -1.96
SDF4Q9BRK5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.79□□□□□ -1.96
SDF4Q9BRK5 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.79□□□□□ -1.96
SDF4Q9BRK5 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 RNU6-552P-201ENST00000362869 119 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 RNU6-996P-201ENST00000365438 107 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 RNU6-301P-201ENST00000384277 107 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 Y_RNA.480-201ENST00000384364 102 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 SNORA41-201ENST00000384675 132 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 SNORD70.1-201ENST00000391007 85 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 RNU6-1158P-201ENST00000391167 107 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AC068050.1-201ENST00000394891 380 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 RNA5SP390-201ENST00000410191 113 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 RNU2-16P-201ENST00000410712 136 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 UBE2V1P10-201ENST00000414685 269 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 EIF4EP4-201ENST00000424916 578 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 HMGB1P31-201ENST00000437242 427 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AP000852.1-201ENST00000472460 573 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 MTCO3P7-201ENST00000510008 774 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 SNORA25.11-201ENST00000515935 105 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 IL7-206ENST00000520269 456 ntTSL 3 BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AL137161.1-201ENST00000532231 390 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AP002770.2-201ENST00000543613 532 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 MIR3941-201ENST00000582572 103 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 MIR4658-201ENST00000584344 65 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AC104073.3-201ENST00000610942 955 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AC073534.2-201ENST00000620377 381 ntBASIC2.78□□□□□ -1.96
SDF4Q9BRK5 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms