Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 PRELID3BP1-201ENST00000457142 540 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 AC134050.1-201ENST00000495088 933 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
IFT140Q96RY7 AC091435.1-201ENST00000505442 584 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.6□□□□□ -2.31
IFT140Q96RY7 PTP4A1P4-201ENST00000512479 322 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
IFT140Q96RY7 ACA64.5-201ENST00000516207 127 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 COPS8P3-201ENST00000526024 482 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 AC090502.2-201ENST00000549267 280 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.6□□□□□ -2.31
IFT140Q96RY7 SNORA77B-201ENST00000578179 125 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 AL158211.4-201ENST00000606988 584 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 AC096586.1-201ENST00000610267 561 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 AC107905.1-201ENST00000616204 426 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 AC087588.2-201ENST00000617667 426 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 AC006213.5-201ENST00000619673 288 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 SGO1P1-201ENST00000603525 1447 ntBASIC0.6□□□□□ -2.31
IFT140Q96RY7 Y_RNA.60-201ENST00000362831 98 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 RNU6-414P-201ENST00000363705 104 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.59□□□□□ -2.32
IFT140Q96RY7 MTCO1P56-201ENST00000401674 224 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 MRPS36P1-201ENST00000421291 307 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 PGBD4P5-201ENST00000445958 426 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 CECR9-201ENST00000453421 199 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.59□□□□□ -2.32
IFT140Q96RY7 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.59□□□□□ -2.32
IFT140Q96RY7 RNU6-581P-201ENST00000516214 105 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 RNVU1-2-201ENST00000516326 135 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 RNU6-586P-201ENST00000517265 104 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC0.59□□□□□ -2.32
IFT140Q96RY7 AC093519.1-201ENST00000566109 298 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 AC073544.2-201ENST00000601155 540 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 AL627230.5-201ENST00000619807 58 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 AC004009.2-201ENST00000623016 728 ntBASIC0.59□□□□□ -2.32
IFT140Q96RY7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.58□□□□□ -2.32
IFT140Q96RY7 Y_RNA.245-201ENST00000364493 95 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.58□□□□□ -2.32
IFT140Q96RY7 SNORD116-23-201ENST00000384645 92 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 MIR16-1-201ENST00000385271 89 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 AL592310.1-201ENST00000414330 671 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 AL451054.2-201ENST00000420896 202 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 ELOCP14-201ENST00000428070 331 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 ELOCP7-201ENST00000439968 331 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 AC004854.1-201ENST00000440356 349 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 SNORD124-201ENST00000459577 104 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 AC079140.2-201ENST00000506193 142 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 AC048346.1-201ENST00000510247 144 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 RNU6-528P-201ENST00000516926 100 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 MIR4661-201ENST00000582720 75 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC0.58□□□□□ -2.32
IFT140Q96RY7 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.58□□□□□ -2.32
IFT140Q96RY7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.58□□□□□ -2.32
IFT140Q96RY7 AL391516.1-201ENST00000554380 2449 ntBASIC0.58□□□□□ -2.32
IFT140Q96RY7 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
IFT140Q96RY7 RNU6-619P-201ENST00000365146 108 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 RNU1-39P-201ENST00000383897 165 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 Y_RNA.390-201ENST00000383932 102 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 RNU6-611P-201ENST00000384276 104 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 MIR100-201ENST00000385259 80 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC0.57□□□□□ -2.32
IFT140Q96RY7 RNU2-48P-201ENST00000410694 191 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 MTND2P5-201ENST00000432656 1006 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 AC027119.1-201ENST00000440877 241 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.57□□□□□ -2.32
IFT140Q96RY7 AC010409.1-201ENST00000487382 476 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.57□□□□□ -2.32
IFT140Q96RY7 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC0.57□□□□□ -2.32
IFT140Q96RY7 RNU4-77P-201ENST00000516692 156 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 AP000763.2-201ENST00000540641 163 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.57□□□□□ -2.32
IFT140Q96RY7 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 AC090617.9-201ENST00000623751 147 ntBASIC0.57□□□□□ -2.32
IFT140Q96RY7 RNU1-96P-201ENST00000364163 162 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 SNORA27.3-201ENST00000364937 134 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 RNU6-968P-201ENST00000384076 107 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 SNORA29-201ENST00000384183 140 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 RNU6-658P-201ENST00000384606 106 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 AL117342.1-201ENST00000404861 406 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 TRIM60P5Y-201ENST00000413946 574 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 RAD1P2-201ENST00000446414 663 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 AC114982.1-201ENST00000469402 321 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.56□□□□□ -2.32
IFT140Q96RY7 HMGN1P13-201ENST00000505795 138 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 RNU6-678P-201ENST00000516832 109 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 AC136628.3-201ENST00000521868 290 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC0.56□□□□□ -2.32
IFT140Q96RY7 MIR4636-201ENST00000582271 80 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 AC011451.2-201ENST00000604303 598 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 AC099654.5-201ENST00000636479 350 ntBASIC0.56□□□□□ -2.32
IFT140Q96RY7 Y_RNA.518-201ENST00000384552 113 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 TMSB4XP8-201ENST00000402089 135 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 MRPL35P1-201ENST00000404272 572 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 AL133475.1-201ENST00000404414 305 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 TMSB4XP6-201ENST00000415187 135 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 TMSB4XP1-201ENST00000424567 135 ntBASIC0.55□□□□□ -2.32
IFT140Q96RY7 SNRPEP7-201ENST00000438350 220 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 148.2 ms