Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AL512286.1-201ENST00000439244 400 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 snoU109.1-201ENST00000459339 135 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 HMGB1P30-201ENST00000492455 606 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 SNORA31.23-201ENST00000517219 133 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AP004607.1-201ENST00000524456 203 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AP005639.2-201ENST00000527592 928 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AP003181.2-201ENST00000528941 181 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC093249.1-201ENST00000567049 203 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC104581.2-201ENST00000572227 430 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 MTCYBP33-201ENST00000575007 1130 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC026271.5-201ENST00000577873 130 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC009977.1-201ENST00000586015 570 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 BNIP3P30-201ENST00000601184 574 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 ELOCP5-201ENST00000604924 333 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC105129.3-201ENST00000605455 485 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 RNU6-87P-201ENST00000607561 108 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AL359314.1-201ENST00000616913 261 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC092192.1-201ENST00000633154 1018 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 AC007671.2-201ENST00000637344 619 ntBASIC1.71□□□□□ -2.14
ECHDC3Q96DC8 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 RNU6-529P-201ENST00000363383 104 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 RNU6-39P-201ENST00000384344 107 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 SNORA40.19-201ENST00000390846 128 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AC114491.1-201ENST00000416095 246 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 CALM1P1-201ENST00000442082 433 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AL136380.1-201ENST00000447970 162 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AL590365.1-201ENST00000450788 243 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AC108210.2-201ENST00000503681 201 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 RNU2-53P-201ENST00000516257 147 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 SNORA25.15-201ENST00000516487 89 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 CBX3P4-201ENST00000538909 354 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AC002400.1-201ENST00000569310 726 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 MIR4524B-201ENST00000581569 115 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 SNRPGP17-201ENST00000603780 214 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AL359999.1-201ENST00000604513 294 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AL451064.1-201ENST00000607718 471 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AC012409.4-201ENST00000612923 249 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 uc_338.15-201ENST00000615470 191 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.7□□□□□ -2.14
ECHDC3Q96DC8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 RNU6-858P-201ENST00000362436 107 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 RNU6-384P-201ENST00000364900 104 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AC244636.1-201ENST00000421152 228 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AC137499.1-201ENST00000427602 88 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 snoU13.14-201ENST00000459372 104 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AC010587.1-201ENST00000505809 469 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AC091965.2-201ENST00000512324 613 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 RNU6-586P-201ENST00000517265 104 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 CYCSP27-201ENST00000527643 293 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AP003461.1-201ENST00000528866 78 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AC090897.2-201ENST00000581715 130 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 CLIC4P2-201ENST00000601934 717 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AC025754.2-201ENST00000606491 432 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.69□□□□□ -2.14
ECHDC3Q96DC8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 FARSBP1-201ENST00000435808 1778 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 RNU5E-1-201ENST00000362477 120 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 Y_RNA.40-201ENST00000362645 93 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 RNU6-1214P-201ENST00000363650 109 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 RNA5SP190-201ENST00000365222 118 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 MIR578-201ENST00000384828 96 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 MIR558-201ENST00000384920 94 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 MTND5P2-201ENST00000442927 1142 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AL137159.1-201ENST00000452808 512 ntBASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.68□□□□□ -2.14
ECHDC3Q96DC8 snoU109.2-201ENST00000459316 135 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms