Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC007785.2-201ENST00000598627 1916 ntBASIC1.59□□□□□ -2.15
SHROOM3Q8TF72 Y_RNA.295-201ENST00000364918 102 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 RNU6-1029P-201ENST00000384109 107 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 MIR1290-201ENST00000408735 78 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AC127391.1-201ENST00000411737 98 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AL590383.1-201ENST00000428602 75 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 RPL36AP53-201ENST00000432891 316 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 MTCO2P16-201ENST00000436962 677 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 RPL31P3-201ENST00000458430 332 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 MRPL42P6-201ENST00000486397 371 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AC090096.1-201ENST00000489168 390 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 RN7SL274P-201ENST00000492268 272 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AC112204.1-201ENST00000502591 103 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 RNU6-1092P-201ENST00000516955 87 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 RNA5SP291-201ENST00000517222 105 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 NBR2-204ENST00000587322 63 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AL360085.1-201ENST00000604713 532 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 RN7SKP299-201ENST00000606679 301 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AL139286.2-201ENST00000606838 396 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AC068944.2-201ENST00000610373 403 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AL133173.2-201ENST00000614270 90 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 AC092140.2-201ENST00000618027 521 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 U2.21-201ENST00000637295 81 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 ZNF519P1-201ENST00000449011 1626 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 OR4G1P-203ENST00000641984 1631 ntBASIC1.59□□□□□ -2.16
SHROOM3Q8TF72 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 RNU6-511P-201ENST00000363496 107 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 SNRPEP9-201ENST00000436794 238 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 MTND4P25-201ENST00000441039 533 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 NEFMP1-201ENST00000443423 1006 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC010424.1-201ENST00000506336 297 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC091965.2-201ENST00000512324 613 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 Vault.3-201ENST00000516676 95 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AL137100.2-201ENST00000555786 315 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC012414.6-201ENST00000568241 401 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC073544.2-201ENST00000601155 540 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC245014.2-201ENST00000603689 287 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC246785.4-201ENST00000605374 287 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 TUG1_2.1-201ENST00000614234 87 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC009090.3-201ENST00000616553 565 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC068831.7-201ENST00000616954 363 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC012640.5-201ENST00000623897 319 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC092656.1-203ENST00000624134 423 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 MIR203B-201ENST00000636080 86 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC073343.1-201ENST00000328239 651 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 RNU6-188P-201ENST00000364207 107 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 Y_RNA.296-201ENST00000364930 108 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 RNU6-140P-201ENST00000384566 108 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 RNA5SP111-201ENST00000411386 101 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 MTND1P12-201ENST00000455231 147 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 RPL26P9-201ENST00000457466 433 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AL162395.1-201ENST00000457882 422 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 RPL37P6-201ENST00000460682 294 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC087588.1-201ENST00000462203 316 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 RNU2-10P-201ENST00000516375 211 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AL359212.1-201ENST00000556608 614 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC005730.3-201ENST00000583067 366 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC064872.1-201ENST00000604823 1072 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AL136363.1-201ENST00000605349 337 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC008945.2-201ENST00000606056 604 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC006566.1-201ENST00000608943 513 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC138749.5-201ENST00000611461 208 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC013476.2-201ENST00000614456 459 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AL359547.2-201ENST00000615810 418 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC116165.2-201ENST00000616705 206 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC068792.1-201ENST00000621354 417 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 AC139792.2-201ENST00000624218 587 ntBASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.58□□□□□ -2.16
SHROOM3Q8TF72 Z82195.2-201ENST00000612348 18351 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 AL137003.2-201ENST00000606924 2538 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 RNU1-105P-201ENST00000363470 161 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 RNY1P12-201ENST00000364251 105 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 SNORA67.1-201ENST00000364749 141 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 Y_RNA.359-201ENST00000365498 102 ntBASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
SHROOM3Q8TF72 SNORA6-201ENST00000384033 151 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 150.9 ms