Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 RNU6-470P-201ENST00000515954 104 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 SNORA31.26-201ENST00000517250 137 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AL391261.3-201ENST00000557194 520 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AC006557.5-201ENST00000603126 811 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AC004852.3-201ENST00000614131 326 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 U4.6-201ENST00000621618 127 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AC090617.7-201ENST00000623952 126 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 U4.7-201ENST00000638126 106 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 AP003122.5-201ENST00000527668 3766 ntBASIC3.14□□□□□ -1.91
PTCHD4Q6ZW05 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 SNORA33.2-201ENST00000365413 134 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 MIR606-201ENST00000384851 96 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 MIR521-1-201ENST00000384902 87 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-174P-201ENST00000410406 106 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 ATP5A1P2-201ENST00000412323 255 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AC243428.1-201ENST00000421099 264 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 MTND2P23-201ENST00000422990 651 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 BX276092.3-201ENST00000424182 230 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 RPL23AP22-201ENST00000437556 453 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 RPL23AP58-201ENST00000440453 469 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 RPL21P23-201ENST00000446654 460 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 U8.21-201ENST00000459536 136 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AC128713.1-201ENST00000471495 306 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-327P-201ENST00000516270 127 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 RN7SKP21-201ENST00000516503 220 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-307P-201ENST00000516743 106 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AC068657.1-201ENST00000520807 306 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AP004607.1-201ENST00000524456 203 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AC005899.2-201ENST00000584353 90 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AC020895.1-201ENST00000595362 272 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AC018889.1-201ENST00000605372 397 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 MIR6810-201ENST00000622701 70 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 AC032011.1-201ENST00000611703 1549 ntBASIC3.13□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.28-201ENST00000362554 111 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.48-201ENST00000362710 103 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-336P-201ENST00000364891 107 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-596P-201ENST00000365395 98 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 U8.8-201ENST00000365399 135 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 MIR1289-1-201ENST00000408836 144 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC096664.2-201ENST00000411843 406 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AL035666.1-201ENST00000446195 348 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 MTND4P19-201ENST00000446659 478 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 NIPA2P5-201ENST00000452282 464 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC133134.1-201ENST00000466800 359 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 FO393415.2-201ENST00000480085 343 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 Y_RNA.661-201ENST00000516003 99 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 SNORA43.2-201ENST00000516652 128 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-699P-201ENST00000517081 110 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 RN7SKP295-201ENST00000517264 153 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC005476.1-201ENST00000554427 397 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 MTCO3P13-201ENST00000577757 781 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 MIR3160-1-201ENST00000577972 85 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 MIR4273-201ENST00000582824 84 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 BNIP3P16-201ENST00000589779 534 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC006504.6-201ENST00000590142 199 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AL451007.1-201ENST00000595491 289 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 SRGNP1-201ENST00000603392 451 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC024220.1-201ENST00000603675 484 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 AC005046.1-201ENST00000608515 625 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 MIR6134-201ENST00000617606 109 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 MTND5P7-201ENST00000413558 1798 ntBASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
PTCHD4Q6ZW05 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-490P-201ENST00000362985 107 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 RNU6-942P-201ENST00000363002 107 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 SNORA41-201ENST00000384675 132 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 AL035423.1-201ENST00000420331 213 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 AC018865.2-201ENST00000423631 129 ntBASIC3.11□□□□□ -1.91
PTCHD4Q6ZW05 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms