Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 SNORD50.1-201ENST00000362987 71 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 U3.13-201ENST00000364804 214 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-611P-201ENST00000384276 104 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 RPL23AP48-201ENST00000406913 488 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AC005326.1-201ENST00000429197 123 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 MTCO3P29-201ENST00000432119 779 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AC078817.1-201ENST00000492623 435 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AC078918.1-201ENST00000498515 228 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 Y_RNA.673-201ENST00000516306 88 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AC005476.1-201ENST00000554427 397 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AL137849.1-201ENST00000604767 169 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AC243829.7-201ENST00000633081 225 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 AL359693.1-201ENST00000614959 2407 ntBASIC4.6□□□□□ -1.67
PRPF40BQ6NWY9 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 Y_RNA.27-201ENST00000362540 103 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 Y_RNA.123-201ENST00000363338 102 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 Y_RNA.478-201ENST00000384358 107 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 Y_RNA.562-201ENST00000384695 113 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 RNU6-1093P-201ENST00000391194 107 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 RAC1P3-201ENST00000416129 580 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 RPL21P66-201ENST00000426566 466 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 SNORA71B-202ENST00000439232 272 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 AC124916.1-201ENST00000444020 547 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 snoU109.2-201ENST00000459316 135 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 TRBV12-2-201ENST00000489763 344 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 RNA5SP208-201ENST00000516156 78 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 SNORA70.16-201ENST00000516390 95 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 Y_RNA.706-201ENST00000516933 99 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 TRAV28-201ENST00000557548 323 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 AC006077.1-201ENST00000604746 343 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 AC099506.2-201ENST00000623074 221 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 AC027309.3-201ENST00000623419 351 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 AP001148.1-201ENST00000624124 2359 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 U6.99-201ENST00000637524 83 ntBASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.59□□□□□ -1.67
PRPF40BQ6NWY9 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
PRPF40BQ6NWY9 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PRPF40BQ6NWY9 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
PRPF40BQ6NWY9 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.59□□□□□ -1.68
PRPF40BQ6NWY9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC008568.2-201ENST00000623862 2313 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 RNU6-708P-201ENST00000384217 107 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 RPL21P38-201ENST00000418090 167 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC096920.1-201ENST00000423991 241 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC098614.2-201ENST00000426040 255 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC005300.1-201ENST00000428401 373 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AL591043.1-201ENST00000432461 424 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 RPS6P12-201ENST00000432491 726 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 RBMY2UP-201ENST00000453474 324 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC079354.2-201ENST00000453523 154 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 RPL21P10-201ENST00000463521 490 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 RN7SL807P-201ENST00000470923 297 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AL049873.1-201ENST00000480540 376 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 BTF3L4P4-201ENST00000506381 449 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AL360157.1-201ENST00000565962 87 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 AC073410.2-201ENST00000603240 332 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 BRDTP1-201ENST00000605735 677 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 MIR486-1-201ENST00000612171 68 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
PRPF40BQ6NWY9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PRPF40BQ6NWY9 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms