Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 RNU6-1208P-201ENST00000459588 107 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 RPS29P12-201ENST00000460178 152 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 RN7SL297P-201ENST00000483161 293 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.89□□□□□ -1.95
USP41Q3LFD5 Y_RNA.654-201ENST00000497848 106 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.89□□□□□ -1.95
USP41Q3LFD5 RAC1P5-201ENST00000512182 576 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 AL121821.2-201ENST00000556081 394 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 MTCO3P23-201ENST00000561363 289 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 AC234778.2-201ENST00000566241 354 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.89□□□□□ -1.95
USP41Q3LFD5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 RMST_4.1-201ENST00000616886 107 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
USP41Q3LFD5 AC099654.7-201ENST00000635788 2127 ntBASIC2.89□□□□□ -1.95
USP41Q3LFD5 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
USP41Q3LFD5 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
USP41Q3LFD5 RNU6-82P-201ENST00000363970 107 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 RNU6-266P-201ENST00000364225 107 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 Y_RNA.324-201ENST00000365165 102 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 RNA5SP118-201ENST00000410385 109 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 SRIP2-201ENST00000428470 166 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.88□□□□□ -1.95
USP41Q3LFD5 RBMX2P4-201ENST00000441256 376 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 EEF1B2P7-201ENST00000451177 676 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.88□□□□□ -1.95
USP41Q3LFD5 HMGN2P26-201ENST00000463169 339 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 AC083904.1-201ENST00000487828 231 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.88□□□□□ -1.95
USP41Q3LFD5 RPS27P26-201ENST00000494583 239 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 AC026801.1-201ENST00000497178 464 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 RNU6-581P-201ENST00000516214 105 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 AC006199.1-201ENST00000548728 219 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 AC090115.3-201ENST00000553218 849 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.88□□□□□ -1.95
USP41Q3LFD5 AC025281.1-201ENST00000567026 265 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 MIR4801-201ENST00000582704 82 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 AC020895.1-201ENST00000595362 272 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 MIR6817-201ENST00000615588 66 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 AC243829.7-201ENST00000633081 225 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 AC110079.1-202ENST00000635213 138 ntBASIC2.88□□□□□ -1.95
USP41Q3LFD5 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP41Q3LFD5 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.87□□□□□ -1.95
USP41Q3LFD5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
USP41Q3LFD5 RNU6-522P-201ENST00000364497 107 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 U3.12-201ENST00000364498 214 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 Y_RNA.480-201ENST00000384364 102 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 RPLP0P7-201ENST00000416050 667 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 RPL7P10-201ENST00000417407 739 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 RPL30P16-201ENST00000419341 429 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 AC009414.1-201ENST00000427200 443 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 AL513328.1-201ENST00000446460 224 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 AC092001.1-201ENST00000453012 261 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 RPL31P58-201ENST00000469001 379 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 AC003982.1-202ENST00000469928 248 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.87□□□□□ -1.95
USP41Q3LFD5 RNU6-358P-201ENST00000516564 75 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 AP000763.2-201ENST00000540641 163 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.87□□□□□ -1.95
USP41Q3LFD5 AL355877.2-201ENST00000603670 358 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 AC087045.1-201ENST00000605856 382 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 AC116312.1-201ENST00000606841 314 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 MIR6134-201ENST00000617606 109 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 AC103705.1-201ENST00000619013 241 ntBASIC2.87□□□□□ -1.95
USP41Q3LFD5 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.87□□□□□ -1.95
USP41Q3LFD5 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.87□□□□□ -1.95
USP41Q3LFD5 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP41Q3LFD5 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
USP41Q3LFD5 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USP41Q3LFD5 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
USP41Q3LFD5 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
USP41Q3LFD5 RNU6-1280P-201ENST00000365211 107 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 RNU6-1283P-201ENST00000365314 105 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 MIR518D-201ENST00000385014 87 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AL356057.3-201ENST00000402607 340 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 RNA5SP508-201ENST00000411327 119 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AC112220.1-201ENST00000434628 355 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 HMGB1P31-201ENST00000437242 427 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.86□□□□□ -1.95
USP41Q3LFD5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.86□□□□□ -1.95
USP41Q3LFD5 AC087884.1-201ENST00000469738 328 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AC090525.1-201ENST00000479116 478 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 Y_RNA.665-201ENST00000516177 98 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 Y_RNA.687-201ENST00000516558 91 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 RPL7P20-201ENST00000520308 745 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AF235103.2-201ENST00000525753 346 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 MIR3945-201ENST00000581853 98 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 MIR3605-201ENST00000583214 100 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AC060780.3-201ENST00000589464 80 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AL121757.2-201ENST00000611223 313 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AL359198.2-201ENST00000611836 194 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AC011890.2-201ENST00000613393 294 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AC002064.3-201ENST00000623448 346 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 AC090617.10-201ENST00000624308 134 ntBASIC2.86□□□□□ -1.95
USP41Q3LFD5 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
USP41Q3LFD5 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
USP41Q3LFD5 RPL9P7-201ENST00000330965 580 ntBASIC2.85□□□□□ -1.95
USP41Q3LFD5 Y_RNA.86-201ENST00000363020 111 ntBASIC2.85□□□□□ -1.95
USP41Q3LFD5 Y_RNA.157-201ENST00000363638 102 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms