Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 7SK.8-201ENST00000612110 250 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 7SK.11-201ENST00000615477 250 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AL590240.4-201ENST00000616908 390 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 7SK.13-201ENST00000622040 250 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 AC095038.3-201ENST00000634439 195 ntBASIC0.54□□□□□ -2.32
HIST1H1AQ02539 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.53□□□□□ -2.32
HIST1H1AQ02539 RNU6-655P-201ENST00000362858 107 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 SNORA4.1-201ENST00000364263 144 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 RNU6-353P-201ENST00000364266 108 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 RNU6-898P-201ENST00000365627 104 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 RNU6-733P-201ENST00000410759 104 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AP000275.1-201ENST00000411943 390 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.53□□□□□ -2.32
HIST1H1AQ02539 TPMTP2-201ENST00000414372 726 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 CYCSP33-201ENST00000414485 327 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AL590623.1-201ENST00000427864 105 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 COX7BP2-201ENST00000437976 242 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 KATNBL1P3-201ENST00000443475 909 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 Z73417.1-201ENST00000447373 778 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 MTND1P18-201ENST00000448191 573 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 RNU6-197P-201ENST00000516680 100 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AP001189.2-201ENST00000527320 189 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AC008015.1-201ENST00000555505 465 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AC136618.2-201ENST00000575091 400 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AC021171.1-201ENST00000603137 706 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AC112220.2-201ENST00000605513 533 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AC123767.1-202ENST00000620407 817 ntBASIC0.53□□□□□ -2.32
HIST1H1AQ02539 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HIST1H1AQ02539 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.52□□□□□ -2.33
HIST1H1AQ02539 MIR337-201ENST00000362281 93 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 RNU6-743P-201ENST00000364151 106 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 RNU6-512P-201ENST00000364438 103 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 MIR608-201ENST00000384820 100 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
HIST1H1AQ02539 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 HMGN1P14-201ENST00000412459 517 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 RPL21P111-201ENST00000418453 477 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H1AQ02539 BX119904.4-201ENST00000424402 301 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 AC004941.2-201ENST00000427009 228 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 HSPE1P9-201ENST00000440046 311 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC0.52□□□□□ -2.33
HIST1H1AQ02539 AC130509.1-201ENST00000464158 433 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 AC093809.1-201ENST00000509155 340 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 RNA5SP102-201ENST00000516865 106 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H1AQ02539 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.52□□□□□ -2.33
HIST1H1AQ02539 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.52□□□□□ -2.33
HIST1H1AQ02539 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.52□□□□□ -2.33
HIST1H1AQ02539 AC018926.1-201ENST00000616335 435 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 MIR6835-201ENST00000621552 64 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 AC022513.1-201ENST00000624512 117 ntBASIC0.52□□□□□ -2.33
HIST1H1AQ02539 RNU6-216P-201ENST00000363282 104 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 RNU6-114P-201ENST00000384704 105 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 MTCO1P56-201ENST00000401674 224 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 AC104651.1-201ENST00000427559 735 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.51□□□□□ -2.33
HIST1H1AQ02539 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC0.51□□□□□ -2.33
HIST1H1AQ02539 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.51□□□□□ -2.33
HIST1H1AQ02539 RPL30P6-201ENST00000475925 342 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 AC034244.1-201ENST00000507687 207 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.51□□□□□ -2.33
HIST1H1AQ02539 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.51□□□□□ -2.33
HIST1H1AQ02539 AC018630.2-201ENST00000534866 2403 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 AC109446.2-201ENST00000567872 497 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 AC008751.2-201ENST00000597885 980 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 AL590095.2-201ENST00000604136 117 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 BNIP3P10-201ENST00000605360 577 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 MIR6767-201ENST00000637302 66 ntBASIC0.51□□□□□ -2.33
HIST1H1AQ02539 RNU6-1210P-201ENST00000363775 107 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 RNU6-487P-201ENST00000365430 104 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 MIR508-201ENST00000384857 115 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 MIR520A-201ENST00000384862 85 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 CBX3P9-201ENST00000402326 552 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
HIST1H1AQ02539 FO393414.1-201ENST00000428697 1184 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 AL603825.1-201ENST00000438481 80 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 MTATP6P30-201ENST00000443540 664 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 MTND5P8-201ENST00000449817 1083 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 RNU1-131P-201ENST00000458943 161 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 RNA5SP269-201ENST00000459032 137 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.5□□□□□ -2.33
HIST1H1AQ02539 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.5□□□□□ -2.33
HIST1H1AQ02539 AC093012.1-202ENST00000549403 582 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 AC044913.1-201ENST00000557200 430 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 MIR5094-201ENST00000578766 85 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.5□□□□□ -2.33
HIST1H1AQ02539 VN1R83P-201ENST00000595685 445 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.5□□□□□ -2.33
HIST1H1AQ02539 AP001981.2-201ENST00000603241 418 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 AC253576.2-201ENST00000618815 580 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 AL445264.1-201ENST00000621719 171 ntBASIC0.5□□□□□ -2.33
HIST1H1AQ02539 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 172.2 ms