Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.05□□□□□ -1.92
RAE1P78406 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RAE1P78406 RPL9P7-201ENST00000330965 580 ntBASIC3.05□□□□□ -1.92
RAE1P78406 MIR369-201ENST00000362155 70 ntBASIC3.05□□□□□ -1.92
RAE1P78406 Y_RNA.128-201ENST00000363391 112 ntBASIC3.05□□□□□ -1.92
RAE1P78406 RNU6-105P-201ENST00000363909 104 ntBASIC3.05□□□□□ -1.92
RAE1P78406 RNU6-1317P-201ENST00000364582 104 ntBASIC3.05□□□□□ -1.92
RAE1P78406 RNU6-336P-201ENST00000364891 107 ntBASIC3.05□□□□□ -1.92
RAE1P78406 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.05□□□□□ -1.92
RAE1P78406 RNU6-1040P-201ENST00000383974 107 ntBASIC3.05□□□□□ -1.92
RAE1P78406 RNU6-890P-201ENST00000384121 107 ntBASIC3.05□□□□□ -1.92
RAE1P78406 RNU6-842P-201ENST00000384269 107 ntBASIC3.05□□□□□ -1.92
RAE1P78406 MIR200C-201ENST00000384980 68 ntBASIC3.05□□□□□ -1.92
RAE1P78406 RNA5SP252-201ENST00000391131 119 ntBASIC3.05□□□□□ -1.92
RAE1P78406 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.05□□□□□ -1.92
RAE1P78406 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC3.05□□□□□ -1.92
RAE1P78406 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.05□□□□□ -1.92
RAE1P78406 AL513043.1-201ENST00000439124 535 ntBASIC3.05□□□□□ -1.92
RAE1P78406 FTH1P25-201ENST00000447665 469 ntBASIC3.05□□□□□ -1.92
RAE1P78406 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.05□□□□□ -1.92
RAE1P78406 SNORA84-201ENST00000459229 133 ntBASIC3.05□□□□□ -1.92
RAE1P78406 RPL21P10-201ENST00000463521 490 ntBASIC3.05□□□□□ -1.92
RAE1P78406 RPL9P9-202ENST00000466501 579 ntBASIC3.05□□□□□ -1.92
RAE1P78406 ACA59.1-201ENST00000515966 143 ntBASIC3.05□□□□□ -1.92
RAE1P78406 RNU6-307P-201ENST00000516743 106 ntBASIC3.05□□□□□ -1.92
RAE1P78406 AC006199.1-201ENST00000548728 219 ntBASIC3.05□□□□□ -1.92
RAE1P78406 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.05□□□□□ -1.92
RAE1P78406 AC021739.1-201ENST00000559631 174 ntBASIC3.05□□□□□ -1.92
RAE1P78406 AC020661.2-201ENST00000560114 134 ntBASIC3.05□□□□□ -1.92
RAE1P78406 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.05□□□□□ -1.92
RAE1P78406 SRGNP1-201ENST00000603392 451 ntBASIC3.05□□□□□ -1.92
RAE1P78406 ADAM3A-203ENST00000461344 2157 ntBASIC3.05□□□□□ -1.92
RAE1P78406 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
RAE1P78406 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
RAE1P78406 MTCO1P12-201ENST00000414273 1543 ntBASIC3.04□□□□□ -1.92
RAE1P78406 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RAE1P78406 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.04□□□□□ -1.92
RAE1P78406 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RAE1P78406 AC233263.6-201ENST00000631132 1963 ntBASIC3.04□□□□□ -1.92
RAE1P78406 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
RAE1P78406 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RAE1P78406 Y_RNA.197-201ENST00000364004 102 ntBASIC3.04□□□□□ -1.92
RAE1P78406 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RAE1P78406 RNU6-174P-201ENST00000410406 106 ntBASIC3.04□□□□□ -1.92
RAE1P78406 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.04□□□□□ -1.92
RAE1P78406 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.04□□□□□ -1.92
RAE1P78406 AC006946.1-201ENST00000429106 328 ntBASIC3.04□□□□□ -1.92
RAE1P78406 Y_RNA.631-201ENST00000459607 101 ntBASIC3.04□□□□□ -1.92
RAE1P78406 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.04□□□□□ -1.92
RAE1P78406 AC068657.1-201ENST00000520807 306 ntBASIC3.04□□□□□ -1.92
RAE1P78406 AC010186.2-204ENST00000537668 439 ntBASIC3.04□□□□□ -1.92
RAE1P78406 AC005899.2-201ENST00000584353 90 ntBASIC3.04□□□□□ -1.92
RAE1P78406 AC020895.1-201ENST00000595362 272 ntBASIC3.04□□□□□ -1.92
RAE1P78406 AC011890.2-201ENST00000613393 294 ntBASIC3.04□□□□□ -1.92
RAE1P78406 uc_338.25-201ENST00000613756 156 ntBASIC3.04□□□□□ -1.92
RAE1P78406 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.04□□□□□ -1.92
RAE1P78406 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.04□□□□□ -1.92
RAE1P78406 AC034229.5-201ENST00000624258 185 ntBASIC3.04□□□□□ -1.92
RAE1P78406 U6.105-201ENST00000637379 88 ntBASIC3.04□□□□□ -1.92
RAE1P78406 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.04□□□□□ -1.92
RAE1P78406 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RAE1P78406 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.04□□□□□ -1.92
RAE1P78406 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
RAE1P78406 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
RAE1P78406 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
RAE1P78406 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RAE1P78406 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RAE1P78406 MIR148B-201ENST00000362252 99 ntBASIC3.03□□□□□ -1.92
RAE1P78406 U3.6-201ENST00000363622 211 ntBASIC3.03□□□□□ -1.92
RAE1P78406 Y_RNA.326-201ENST00000365176 113 ntBASIC3.03□□□□□ -1.92
RAE1P78406 U8.8-201ENST00000365399 135 ntBASIC3.03□□□□□ -1.92
RAE1P78406 MIR183-201ENST00000384958 110 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AL357075.1-201ENST00000404107 726 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.03□□□□□ -1.92
RAE1P78406 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.03□□□□□ -1.92
RAE1P78406 Z82205.1-201ENST00000428456 297 ntBASIC3.03□□□□□ -1.92
RAE1P78406 RPS15AP5-201ENST00000436276 388 ntBASIC3.03□□□□□ -1.92
RAE1P78406 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.03□□□□□ -1.92
RAE1P78406 RPS12P18-201ENST00000442381 270 ntBASIC3.03□□□□□ -1.92
RAE1P78406 Z75741.1-201ENST00000446793 314 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.03□□□□□ -1.92
RAE1P78406 CYCSP35-201ENST00000451978 304 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.03□□□□□ -1.92
RAE1P78406 AL136097.1-201ENST00000456945 913 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AC008571.1-201ENST00000467232 300 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.03□□□□□ -1.92
RAE1P78406 RPL23AP49-201ENST00000492925 468 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AC114801.2-201ENST00000503825 781 ntBASIC3.03□□□□□ -1.92
RAE1P78406 RNU6-976P-201ENST00000516086 111 ntBASIC3.03□□□□□ -1.92
RAE1P78406 RNU6-612P-201ENST00000516909 102 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AC022634.1-201ENST00000520765 532 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.03□□□□□ -1.92
RAE1P78406 AP003072.1-201ENST00000531740 145 ntBASIC3.03□□□□□ -1.92
RAE1P78406 AC078795.3-201ENST00000602913 472 ntBASIC3.03□□□□□ -1.92
RAE1P78406 MIR3976-201ENST00000606807 139 ntBASIC3.03□□□□□ -1.92
RAE1P78406 Y_RNA.812-201ENST00000610788 101 ntBASIC3.03□□□□□ -1.92
RAE1P78406 MIR8076-201ENST00000611401 83 ntBASIC3.03□□□□□ -1.92
RAE1P78406 Y_RNA.784-201ENST00000613803 101 ntBASIC3.03□□□□□ -1.92
RAE1P78406 Y_RNA.787-201ENST00000616522 101 ntBASIC3.03□□□□□ -1.92
RAE1P78406 Y_RNA.780-201ENST00000617336 101 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms