Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.86□□□□□ -1.79
YBX1P67809 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.86□□□□□ -1.79
YBX1P67809 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.86□□□□□ -1.79
YBX1P67809 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
YBX1P67809 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
YBX1P67809 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
YBX1P67809 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
YBX1P67809 AC233981.2-201ENST00000611524 1614 ntBASIC3.85□□□□□ -1.79
YBX1P67809 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
YBX1P67809 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.85□□□□□ -1.79
YBX1P67809 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.85□□□□□ -1.79
YBX1P67809 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
YBX1P67809 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.85□□□□□ -1.79
YBX1P67809 RNU6-222P-201ENST00000362438 107 ntBASIC3.85□□□□□ -1.79
YBX1P67809 SNORA31-201ENST00000362607 130 ntBASIC3.85□□□□□ -1.79
YBX1P67809 RNU6-1301P-201ENST00000362724 104 ntBASIC3.85□□□□□ -1.79
YBX1P67809 RNU4-9P-201ENST00000364951 139 ntBASIC3.85□□□□□ -1.79
YBX1P67809 MIR607-201ENST00000385241 96 ntBASIC3.85□□□□□ -1.79
YBX1P67809 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
YBX1P67809 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
YBX1P67809 SNORA40C-201ENST00000391285 128 ntBASIC3.85□□□□□ -1.79
YBX1P67809 RN7SKP177-201ENST00000410567 355 ntBASIC3.85□□□□□ -1.79
YBX1P67809 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.85□□□□□ -1.79
YBX1P67809 Z85995.1-201ENST00000415547 335 ntBASIC3.85□□□□□ -1.79
YBX1P67809 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.85□□□□□ -1.79
YBX1P67809 AL691449.1-201ENST00000426570 421 ntBASIC3.85□□□□□ -1.79
YBX1P67809 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.85□□□□□ -1.79
YBX1P67809 HSPE1P25-201ENST00000455484 251 ntBASIC3.85□□□□□ -1.79
YBX1P67809 AC109925.1-201ENST00000478069 331 ntBASIC3.85□□□□□ -1.79
YBX1P67809 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.85□□□□□ -1.79
YBX1P67809 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.85□□□□□ -1.79
YBX1P67809 AP006245.1-201ENST00000522549 120 ntBASIC3.85□□□□□ -1.79
YBX1P67809 MRPS36P4-201ENST00000534436 298 ntBASIC3.85□□□□□ -1.79
YBX1P67809 AC107016.1-201ENST00000550463 337 ntBASIC3.85□□□□□ -1.79
YBX1P67809 Z83818.1-201ENST00000603584 150 ntBASIC3.85□□□□□ -1.79
YBX1P67809 AC091167.4-201ENST00000605079 184 ntBASIC3.85□□□□□ -1.79
YBX1P67809 MIR6875-201ENST00000617506 72 ntBASIC3.85□□□□□ -1.79
YBX1P67809 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.85□□□□□ -1.79
YBX1P67809 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
YBX1P67809 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.85□□□□□ -1.79
YBX1P67809 AC106871.1-201ENST00000568324 3102 ntBASIC3.85□□□□□ -1.79
YBX1P67809 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.84□□□□□ -1.79
YBX1P67809 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
YBX1P67809 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
YBX1P67809 RNU6-1020P-201ENST00000363684 107 ntBASIC3.84□□□□□ -1.79
YBX1P67809 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
YBX1P67809 RNU6-629P-201ENST00000384061 103 ntBASIC3.84□□□□□ -1.79
YBX1P67809 RNU6-166P-201ENST00000384371 107 ntBASIC3.84□□□□□ -1.79
YBX1P67809 RNU1-89P-201ENST00000384592 164 ntBASIC3.84□□□□□ -1.79
YBX1P67809 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.84□□□□□ -1.79
YBX1P67809 AL358453.1-201ENST00000422522 250 ntBASIC3.84□□□□□ -1.79
YBX1P67809 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.84□□□□□ -1.79
YBX1P67809 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.84□□□□□ -1.79
YBX1P67809 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.84□□□□□ -1.79
YBX1P67809 SNRPGP5-201ENST00000456003 220 ntBASIC3.84□□□□□ -1.79
YBX1P67809 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.84□□□□□ -1.79
YBX1P67809 BTF3L4P4-201ENST00000506381 449 ntBASIC3.84□□□□□ -1.79
YBX1P67809 RNU6-572P-201ENST00000516724 80 ntBASIC3.84□□□□□ -1.79
YBX1P67809 SNORA31.18-201ENST00000517043 134 ntBASIC3.84□□□□□ -1.79
YBX1P67809 RNA5SP179-201ENST00000517284 121 ntBASIC3.84□□□□□ -1.79
YBX1P67809 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.84□□□□□ -1.79
YBX1P67809 YPEL5P3-201ENST00000547227 352 ntBASIC3.84□□□□□ -1.79
YBX1P67809 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.84□□□□□ -1.79
YBX1P67809 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC3.84□□□□□ -1.79
YBX1P67809 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.84□□□□□ -1.79
YBX1P67809 MIR6500-201ENST00000622700 86 ntBASIC3.84□□□□□ -1.79
YBX1P67809 AC021753.1-201ENST00000635724 168 ntBASIC3.84□□□□□ -1.79
YBX1P67809 U4.7-201ENST00000638126 106 ntBASIC3.84□□□□□ -1.79
YBX1P67809 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
YBX1P67809 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.84□□□□□ -1.79
YBX1P67809 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.84□□□□□ -1.79
YBX1P67809 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.84□□□□□ -1.79
YBX1P67809 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
YBX1P67809 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
YBX1P67809 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.84□□□□□ -1.79
YBX1P67809 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.83□□□□□ -1.8
YBX1P67809 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
YBX1P67809 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
YBX1P67809 AC009541.1-201ENST00000438279 2662 ntBASIC3.83□□□□□ -1.8
YBX1P67809 SNORA60-201ENST00000362396 134 ntBASIC3.83□□□□□ -1.8
YBX1P67809 RNU6-879P-201ENST00000364328 108 ntBASIC3.83□□□□□ -1.8
YBX1P67809 RNY4P28-201ENST00000365281 93 ntBASIC3.83□□□□□ -1.8
YBX1P67809 SNORD63-201ENST00000384262 68 ntBASIC3.83□□□□□ -1.8
YBX1P67809 RNU6-843P-201ENST00000384454 104 ntBASIC3.83□□□□□ -1.8
YBX1P67809 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
YBX1P67809 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.83□□□□□ -1.8
YBX1P67809 AL078601.1-201ENST00000444542 271 ntBASIC3.83□□□□□ -1.8
YBX1P67809 AC016700.2-201ENST00000446011 156 ntBASIC3.83□□□□□ -1.8
YBX1P67809 PRSS3P4-201ENST00000453323 162 ntBASIC3.83□□□□□ -1.8
YBX1P67809 ANP32BP2-201ENST00000454525 545 ntBASIC3.83□□□□□ -1.8
YBX1P67809 AC092798.1-201ENST00000458542 409 ntBASIC3.83□□□□□ -1.8
YBX1P67809 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.83□□□□□ -1.8
YBX1P67809 SNORA31.20-201ENST00000517111 133 ntBASIC3.83□□□□□ -1.8
YBX1P67809 RNU1-45P-201ENST00000517191 141 ntBASIC3.83□□□□□ -1.8
YBX1P67809 AC022559.1-201ENST00000520905 205 ntBASIC3.83□□□□□ -1.8
YBX1P67809 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms