Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC007375.1-201ENST00000554513 578 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC090897.2-201ENST00000581715 130 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC005771.1-201ENST00000585581 349 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC008521.1-201ENST00000587471 187 ntBASIC1.71□□□□□ -2.14
VSX2P58304 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.71□□□□□ -2.14
VSX2P58304 MIR8081-201ENST00000611533 95 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC004223.4-201ENST00000612426 332 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC012409.4-201ENST00000612923 249 ntBASIC1.71□□□□□ -2.14
VSX2P58304 AC092656.1-203ENST00000624134 423 ntBASIC1.71□□□□□ -2.14
VSX2P58304 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
VSX2P58304 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.71□□□□□ -2.14
VSX2P58304 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
VSX2P58304 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
VSX2P58304 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
VSX2P58304 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.7□□□□□ -2.14
VSX2P58304 RNU5F-7P-201ENST00000363696 115 ntBASIC1.7□□□□□ -2.14
VSX2P58304 RNU6-72P-201ENST00000384285 79 ntBASIC1.7□□□□□ -2.14
VSX2P58304 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
VSX2P58304 MRPL42P2-201ENST00000403169 426 ntBASIC1.7□□□□□ -2.14
VSX2P58304 RNU2-63P-201ENST00000410792 194 ntBASIC1.7□□□□□ -2.14
VSX2P58304 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.7□□□□□ -2.14
VSX2P58304 PGBD4P6-201ENST00000421501 610 ntBASIC1.7□□□□□ -2.14
VSX2P58304 RPL31P63-201ENST00000422565 375 ntBASIC1.7□□□□□ -2.14
VSX2P58304 HMGN2P19-201ENST00000425149 265 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AC000111.3-201ENST00000433478 193 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AC104850.1-201ENST00000435940 476 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.7□□□□□ -2.14
VSX2P58304 MED28P2-201ENST00000475771 317 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AP001025.1-201ENST00000486139 332 ntBASIC1.7□□□□□ -2.14
VSX2P58304 MTCYBP35-201ENST00000503630 1137 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.7□□□□□ -2.14
VSX2P58304 RNA5SP458-201ENST00000516188 119 ntBASIC1.7□□□□□ -2.14
VSX2P58304 RNU6-759P-201ENST00000516740 103 ntBASIC1.7□□□□□ -2.14
VSX2P58304 ADI1P3-201ENST00000549509 470 ntBASIC1.7□□□□□ -2.14
VSX2P58304 RPL21P5-201ENST00000554662 472 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.7□□□□□ -2.14
VSX2P58304 AC136619.2-201ENST00000563361 631 ntBASIC1.7□□□□□ -2.14
VSX2P58304 MIR3122-201ENST00000577243 73 ntBASIC1.7□□□□□ -2.14
VSX2P58304 MIR4419B-201ENST00000577260 68 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.7□□□□□ -2.14
VSX2P58304 RPL30P11-203ENST00000598995 310 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AC012065.4-201ENST00000602445 679 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AL121992.2-201ENST00000606262 256 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AC093788.1-201ENST00000609356 927 ntBASIC1.7□□□□□ -2.14
VSX2P58304 AL359547.2-201ENST00000615810 418 ntBASIC1.7□□□□□ -2.14
VSX2P58304 U4atac.1-201ENST00000618345 95 ntBASIC1.7□□□□□ -2.14
VSX2P58304 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.7□□□□□ -2.14
VSX2P58304 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
VSX2P58304 AC138393.1-203ENST00000327086 343 ntBASIC1.69□□□□□ -2.14
VSX2P58304 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.69□□□□□ -2.14
VSX2P58304 SNORD14B-201ENST00000364533 90 ntBASIC1.69□□□□□ -2.14
VSX2P58304 RNU6-169P-201ENST00000365336 107 ntBASIC1.69□□□□□ -2.14
VSX2P58304 SNORA25B-201ENST00000365507 128 ntBASIC1.69□□□□□ -2.14
VSX2P58304 RNU6-61P-201ENST00000365528 109 ntBASIC1.69□□□□□ -2.14
VSX2P58304 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.69□□□□□ -2.14
VSX2P58304 RNU6-843P-201ENST00000384454 104 ntBASIC1.69□□□□□ -2.14
VSX2P58304 RNU6-1179P-201ENST00000384667 107 ntBASIC1.69□□□□□ -2.14
VSX2P58304 MIR558-201ENST00000384920 94 ntBASIC1.69□□□□□ -2.14
VSX2P58304 MIR10A-201ENST00000385043 110 ntBASIC1.69□□□□□ -2.14
VSX2P58304 AC127391.1-201ENST00000411737 98 ntBASIC1.69□□□□□ -2.14
VSX2P58304 HIGD1AP15-201ENST00000416198 280 ntBASIC1.69□□□□□ -2.14
VSX2P58304 ELOCP4-201ENST00000420090 333 ntBASIC1.69□□□□□ -2.14
VSX2P58304 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC1.69□□□□□ -2.14
VSX2P58304 AL645568.3-201ENST00000433683 316 ntBASIC1.69□□□□□ -2.14
VSX2P58304 MTATP6P16-201ENST00000434543 526 ntBASIC1.69□□□□□ -2.14
VSX2P58304 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.69□□□□□ -2.14
VSX2P58304 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC1.69□□□□□ -2.14
VSX2P58304 AC009238.1-201ENST00000442165 424 ntBASIC1.69□□□□□ -2.14
VSX2P58304 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.69□□□□□ -2.14
VSX2P58304 AC009237.6-201ENST00000446969 424 ntBASIC1.69□□□□□ -2.14
VSX2P58304 AL360271.2-201ENST00000447710 161 ntBASIC1.69□□□□□ -2.14
VSX2P58304 AC003071.1-201ENST00000451219 789 ntBASIC1.69□□□□□ -2.14
VSX2P58304 PPP1R2P5-201ENST00000457256 603 ntBASIC1.69□□□□□ -2.14
VSX2P58304 RNU1-86P-201ENST00000516108 154 ntBASIC1.69□□□□□ -2.14
VSX2P58304 SCARNA24.1-201ENST00000516465 137 ntBASIC1.69□□□□□ -2.14
VSX2P58304 RNU1-107P-201ENST00000516617 154 ntBASIC1.69□□□□□ -2.14
VSX2P58304 BNIP3P6-201ENST00000549284 499 ntBASIC1.69□□□□□ -2.14
VSX2P58304 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC1.69□□□□□ -2.14
VSX2P58304 MTND1P24-201ENST00000552175 861 ntBASIC1.69□□□□□ -2.14
VSX2P58304 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.69□□□□□ -2.14
VSX2P58304 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.69□□□□□ -2.14
VSX2P58304 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
VSX2P58304 AL359999.1-201ENST00000604513 294 ntBASIC1.69□□□□□ -2.14
VSX2P58304 AL451064.1-201ENST00000607718 471 ntBASIC1.69□□□□□ -2.14
VSX2P58304 RNU6-91P-201ENST00000607774 107 ntBASIC1.69□□□□□ -2.14
VSX2P58304 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC1.69□□□□□ -2.14
VSX2P58304 AL157786.1-207ENST00000627771 695 ntBASIC1.69□□□□□ -2.14
VSX2P58304 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VSX2P58304 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
VSX2P58304 MIR412-201ENST00000362142 91 ntBASIC1.68□□□□□ -2.14
VSX2P58304 Y_RNA.40-201ENST00000362645 93 ntBASIC1.68□□□□□ -2.14
VSX2P58304 RNU1-17P-201ENST00000363022 152 ntBASIC1.68□□□□□ -2.14
VSX2P58304 SNORD114-19-201ENST00000363072 75 ntBASIC1.68□□□□□ -2.14
VSX2P58304 U8.3-201ENST00000363321 132 ntBASIC1.68□□□□□ -2.14
VSX2P58304 RPL23AP32-201ENST00000395315 459 ntBASIC1.68□□□□□ -2.14
VSX2P58304 AL512604.1-201ENST00000404812 257 ntBASIC1.68□□□□□ -2.14
VSX2P58304 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.68□□□□□ -2.14
VSX2P58304 RNU2-39P-201ENST00000410604 198 ntBASIC1.68□□□□□ -2.14
VSX2P58304 RNU6-195P-201ENST00000411352 109 ntBASIC1.68□□□□□ -2.14
VSX2P58304 EEF1A1P40-201ENST00000412883 573 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms