Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU6-942P-201ENST00000363002 107 ntBASIC1.88□□□□□ -2.11
CDH4P55283 RNU6-1179P-201ENST00000384667 107 ntBASIC1.88□□□□□ -2.11
CDH4P55283 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.88□□□□□ -2.11
CDH4P55283 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH4P55283 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.88□□□□□ -2.11
CDH4P55283 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.88□□□□□ -2.11
CDH4P55283 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.88□□□□□ -2.11
CDH4P55283 AC003989.2-201ENST00000440224 169 ntBASIC1.88□□□□□ -2.11
CDH4P55283 CALM1P1-201ENST00000442082 433 ntBASIC1.88□□□□□ -2.11
CDH4P55283 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.88□□□□□ -2.11
CDH4P55283 AC007677.1-201ENST00000445757 515 ntBASIC1.88□□□□□ -2.11
CDH4P55283 FDX1P2-201ENST00000450769 375 ntBASIC1.88□□□□□ -2.11
CDH4P55283 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.88□□□□□ -2.11
CDH4P55283 RNU6-667P-201ENST00000517186 102 ntBASIC1.88□□□□□ -2.11
CDH4P55283 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.88□□□□□ -2.11
CDH4P55283 IMMP1LP2-201ENST00000552954 492 ntBASIC1.88□□□□□ -2.11
CDH4P55283 OR11H5P-201ENST00000554039 926 ntBASIC1.88□□□□□ -2.11
CDH4P55283 AC008015.1-201ENST00000555505 465 ntBASIC1.88□□□□□ -2.11
CDH4P55283 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.88□□□□□ -2.11
CDH4P55283 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
CDH4P55283 AC011494.1-201ENST00000596454 237 ntBASIC1.88□□□□□ -2.11
CDH4P55283 WISP1-OT1-201ENST00000602893 642 ntBASIC1.88□□□□□ -2.11
CDH4P55283 AL022161.1-201ENST00000604390 213 ntBASIC1.88□□□□□ -2.11
CDH4P55283 AC098614.4-201ENST00000607601 462 ntBASIC1.88□□□□□ -2.11
CDH4P55283 AC079248.2-201ENST00000623779 326 ntBASIC1.88□□□□□ -2.11
CDH4P55283 AC241585.2-209ENST00000638217 143 ntBASIC1.88□□□□□ -2.11
CDH4P55283 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.88□□□□□ -2.11
CDH4P55283 AC103710.2-202ENST00000641454 2853 ntBASIC1.88□□□□□ -2.11
CDH4P55283 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CDH4P55283 SNORD115-3-201ENST00000363100 82 ntBASIC1.87□□□□□ -2.11
CDH4P55283 SNORD14B-201ENST00000364533 90 ntBASIC1.87□□□□□ -2.11
CDH4P55283 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
CDH4P55283 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH4P55283 SNORD116-20-201ENST00000384529 92 ntBASIC1.87□□□□□ -2.11
CDH4P55283 MIR518A2-201ENST00000384966 87 ntBASIC1.87□□□□□ -2.11
CDH4P55283 MIR9-3-201ENST00000385084 90 ntBASIC1.87□□□□□ -2.11
CDH4P55283 RNA5SP450-201ENST00000411206 102 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH4P55283 ELOCP4-201ENST00000420090 333 ntBASIC1.87□□□□□ -2.11
CDH4P55283 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.87□□□□□ -2.11
CDH4P55283 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH4P55283 RPL7P54-201ENST00000438336 674 ntBASIC1.87□□□□□ -2.11
CDH4P55283 MTND6P13-201ENST00000443510 523 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.87□□□□□ -2.11
CDH4P55283 AL137159.1-201ENST00000452808 512 ntBASIC1.87□□□□□ -2.11
CDH4P55283 RNU7-125P-201ENST00000458760 62 ntBASIC1.87□□□□□ -2.11
CDH4P55283 MTCO2P29-201ENST00000465212 189 ntBASIC1.87□□□□□ -2.11
CDH4P55283 RPL30P6-201ENST00000475925 342 ntBASIC1.87□□□□□ -2.11
CDH4P55283 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC1.87□□□□□ -2.11
CDH4P55283 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH4P55283 MRPS17P9-201ENST00000511924 393 ntBASIC1.87□□□□□ -2.11
CDH4P55283 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH4P55283 AC091965.2-201ENST00000512324 613 ntBASIC1.87□□□□□ -2.11
CDH4P55283 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH4P55283 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
CDH4P55283 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH4P55283 AK6P1-201ENST00000540219 478 ntBASIC1.87□□□□□ -2.11
CDH4P55283 NDUFA5P6-201ENST00000542110 379 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH4P55283 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.87□□□□□ -2.11
CDH4P55283 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.87□□□□□ -2.11
CDH4P55283 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH4P55283 AC104984.5-201ENST00000586878 94 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AL138889.2-201ENST00000603883 242 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AL670379.2-201ENST00000604983 252 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AL670379.4-201ENST00000605279 254 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AL139286.2-201ENST00000606838 396 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AL360219.1-201ENST00000610230 366 ntBASIC1.87□□□□□ -2.11
CDH4P55283 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.87□□□□□ -2.11
CDH4P55283 MIR6715A-201ENST00000615929 79 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AC009159.2-201ENST00000617603 606 ntBASIC1.87□□□□□ -2.11
CDH4P55283 AC099654.13-201ENST00000639774 207 ntBASIC1.87□□□□□ -2.11
CDH4P55283 HAUS6P2-201ENST00000433254 2404 ntBASIC1.86□□□□□ -2.11
CDH4P55283 RNU5E-5P-201ENST00000365379 116 ntBASIC1.86□□□□□ -2.11
CDH4P55283 RNU6-641P-201ENST00000384006 107 ntBASIC1.86□□□□□ -2.11
CDH4P55283 MIR1294-201ENST00000408503 142 ntBASIC1.86□□□□□ -2.11
CDH4P55283 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH4P55283 Z99497.1-201ENST00000421282 135 ntBASIC1.86□□□□□ -2.11
CDH4P55283 HMGN2P19-201ENST00000425149 265 ntBASIC1.86□□□□□ -2.11
CDH4P55283 AL589872.1-201ENST00000426602 288 ntBASIC1.86□□□□□ -2.11
CDH4P55283 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH4P55283 AL353689.1-201ENST00000438895 199 ntBASIC1.86□□□□□ -2.11
CDH4P55283 USP9YP15-201ENST00000442391 422 ntBASIC1.86□□□□□ -2.11
CDH4P55283 NDUFB1P2-201ENST00000449477 176 ntBASIC1.86□□□□□ -2.11
CDH4P55283 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.86□□□□□ -2.11
CDH4P55283 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH4P55283 Y_RNA.687-201ENST00000516558 91 ntBASIC1.86□□□□□ -2.11
CDH4P55283 RNU6-759P-201ENST00000516740 103 ntBASIC1.86□□□□□ -2.11
CDH4P55283 AC109329.1-201ENST00000518744 317 ntBASIC1.86□□□□□ -2.11
CDH4P55283 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CDH4P55283 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH4P55283 CR383656.8-201ENST00000549046 145 ntBASIC1.86□□□□□ -2.11
CDH4P55283 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.86□□□□□ -2.11
CDH4P55283 MIR3935-201ENST00000583472 104 ntBASIC1.86□□□□□ -2.11
CDH4P55283 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.86□□□□□ -2.11
CDH4P55283 AC243960.4-201ENST00000600532 288 ntBASIC1.86□□□□□ -2.11
CDH4P55283 SNRPGP17-201ENST00000603780 214 ntBASIC1.86□□□□□ -2.11
CDH4P55283 AC009878.1-201ENST00000621819 340 ntBASIC1.86□□□□□ -2.11
CDH4P55283 MIR7843-201ENST00000622274 79 ntBASIC1.86□□□□□ -2.11
CDH4P55283 SCARNA4-202ENST00000625402 129 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms